Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MMP8P22894 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 AP000523.1-201ENST00000398242 1049 ntBASIC19.37■□□□□ 0.69
MMP8P22894 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
MMP8P22894 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.37■□□□□ 0.69
MMP8P22894 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP8P22894 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
MMP8P22894 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
MMP8P22894 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP8P22894 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP8P22894 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
MMP8P22894 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
MMP8P22894 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.36■□□□□ 0.69
MMP8P22894 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MMP8P22894 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MMP8P22894 AC010203.1-204ENST00000548782 407 ntBASIC19.36■□□□□ 0.69
MMP8P22894 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.36■□□□□ 0.69
MMP8P22894 MIR3917-201ENST00000580971 93 ntBASIC19.36■□□□□ 0.69
MMP8P22894 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.36■□□□□ 0.69
MMP8P22894 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MMP8P22894 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.36■□□□□ 0.69
MMP8P22894 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP8P22894 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MMP8P22894 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
MMP8P22894 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP8P22894 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP8P22894 LINC01126-201ENST00000623515 1646 ntBASIC19.36■□□□□ 0.69
MMP8P22894 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.36■□□□□ 0.69
MMP8P22894 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MMP8P22894 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP8P22894 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP8P22894 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
MMP8P22894 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP8P22894 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MMP8P22894 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP8P22894 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP8P22894 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP8P22894 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP8P22894 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
MMP8P22894 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.35■□□□□ 0.69
MMP8P22894 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP8P22894 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 AL096828.2-201ENST00000567259 1965 ntBASIC19.35■□□□□ 0.69
MMP8P22894 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
MMP8P22894 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 AL024508.2-201ENST00000607749 1894 ntBASIC19.35■□□□□ 0.69
MMP8P22894 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP8P22894 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP8P22894 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MMP8P22894 REXO1L9P-201ENST00000604264 2108 ntBASIC19.34■□□□□ 0.69
MMP8P22894 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP8P22894 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP8P22894 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP8P22894 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
MMP8P22894 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP8P22894 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
MMP8P22894 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.34■□□□□ 0.69
MMP8P22894 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.34■□□□□ 0.69
MMP8P22894 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MMP8P22894 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.34■□□□□ 0.69
MMP8P22894 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
MMP8P22894 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.34■□□□□ 0.69
MMP8P22894 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MMP8P22894 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.34■□□□□ 0.69
MMP8P22894 AC092865.7-201ENST00000641832 219 ntBASIC19.34■□□□□ 0.69
MMP8P22894 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP8P22894 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.34■□□□□ 0.69
MMP8P22894 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP8P22894 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP8P22894 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.34■□□□□ 0.69
MMP8P22894 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP8P22894 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
MMP8P22894 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.34■□□□□ 0.69
MMP8P22894 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP8P22894 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.34■□□□□ 0.69
MMP8P22894 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.33■□□□□ 0.69
MMP8P22894 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
MMP8P22894 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
MMP8P22894 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MMP8P22894 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MMP8P22894 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms