Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH3P22223 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH3P22223 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH3P22223 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CDH3P22223 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH3P22223 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH3P22223 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH3P22223 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH3P22223 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CDH3P22223 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH3P22223 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH3P22223 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH3P22223 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH3P22223 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 AL138781.2-201ENST00000617896 1843 ntBASIC18.03■□□□□ 0.48
CDH3P22223 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH3P22223 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH3P22223 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.03■□□□□ 0.48
CDH3P22223 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH3P22223 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.03■□□□□ 0.48
CDH3P22223 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CDH3P22223 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH3P22223 AL109659.2-201ENST00000606809 1674 ntBASIC18.03■□□□□ 0.48
CDH3P22223 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH3P22223 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.02■□□□□ 0.48
CDH3P22223 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDH3P22223 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH3P22223 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH3P22223 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH3P22223 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.02■□□□□ 0.48
CDH3P22223 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH3P22223 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDH3P22223 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CDH3P22223 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH3P22223 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH3P22223 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH3P22223 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH3P22223 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.02■□□□□ 0.48
CDH3P22223 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH3P22223 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.02■□□□□ 0.48
CDH3P22223 GCSHP2-201ENST00000560971 527 ntBASIC18.02■□□□□ 0.48
CDH3P22223 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH3P22223 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH3P22223 BCL2-203ENST00000589955 5011 ntBASIC18.02■□□□□ 0.48
CDH3P22223 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDH3P22223 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH3P22223 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH3P22223 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.02■□□□□ 0.47
CDH3P22223 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDH3P22223 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CDH3P22223 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH3P22223 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDH3P22223 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH3P22223 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH3P22223 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 AC008556.1-201ENST00000610908 2040 ntBASIC18.01■□□□□ 0.47
CDH3P22223 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH3P22223 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH3P22223 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
CDH3P22223 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH3P22223 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH3P22223 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH3P22223 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CDH3P22223 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CDH3P22223 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CDH3P22223 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH3P22223 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH3P22223 KRT8P32-201ENST00000512863 1461 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms