Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KRT4P19013 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
KRT4P19013 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
KRT4P19013 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT4P19013 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.5■□□□□ 0.55
KRT4P19013 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT4P19013 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 MTDHP1-201ENST00000605323 784 ntBASIC18.5■□□□□ 0.55
KRT4P19013 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.5■□□□□ 0.55
KRT4P19013 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.5■□□□□ 0.55
KRT4P19013 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.5■□□□□ 0.55
KRT4P19013 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.5■□□□□ 0.55
KRT4P19013 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.5■□□□□ 0.55
KRT4P19013 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT4P19013 AL096828.2-201ENST00000567259 1965 ntBASIC18.5■□□□□ 0.55
KRT4P19013 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
KRT4P19013 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
KRT4P19013 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
KRT4P19013 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KRT4P19013 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
KRT4P19013 OR6D1P-202ENST00000641007 5290 ntBASIC18.49■□□□□ 0.55
KRT4P19013 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.49■□□□□ 0.55
KRT4P19013 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.49■□□□□ 0.55
KRT4P19013 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
KRT4P19013 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 UNC93B5-201ENST00000530315 699 ntBASIC18.49■□□□□ 0.55
KRT4P19013 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.49■□□□□ 0.55
KRT4P19013 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.49■□□□□ 0.55
KRT4P19013 AC008403.3-201ENST00000598924 454 ntBASIC18.49■□□□□ 0.55
KRT4P19013 AL445675.2-201ENST00000620291 557 ntBASIC18.49■□□□□ 0.55
KRT4P19013 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.49■□□□□ 0.55
KRT4P19013 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 SIRPAP1-201ENST00000448467 1770 ntBASIC18.49■□□□□ 0.55
KRT4P19013 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.49■□□□□ 0.55
KRT4P19013 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
KRT4P19013 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 AL645608.8-201ENST00000606034 2086 ntBASIC18.49■□□□□ 0.55
KRT4P19013 AC009053.2-201ENST00000563701 2365 ntBASIC18.49■□□□□ 0.55
KRT4P19013 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.49■□□□□ 0.55
KRT4P19013 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
KRT4P19013 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT4P19013 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.49■□□□□ 0.55
KRT4P19013 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.49■□□□□ 0.55
KRT4P19013 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT4P19013 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT4P19013 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT4P19013 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KRT4P19013 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KRT4P19013 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT4P19013 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
KRT4P19013 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT4P19013 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT4P19013 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT4P19013 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT4P19013 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT4P19013 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
KRT4P19013 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.48■□□□□ 0.55
KRT4P19013 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KRT4P19013 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.48■□□□□ 0.55
KRT4P19013 AC131212.4-201ENST00000623606 975 ntBASIC18.48■□□□□ 0.55
KRT4P19013 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT4P19013 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT4P19013 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT4P19013 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
KRT4P19013 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.48■□□□□ 0.55
KRT4P19013 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KRT4P19013 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
KRT4P19013 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KRT4P19013 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT4P19013 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.47■□□□□ 0.55
KRT4P19013 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KRT4P19013 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms