Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NCK1P16333 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.43■□□□□ 0.38
NCK1P16333 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCK1P16333 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.42■□□□□ 0.38
NCK1P16333 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.42■□□□□ 0.38
NCK1P16333 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
NCK1P16333 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NCK1P16333 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.42■□□□□ 0.38
NCK1P16333 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
NCK1P16333 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.42■□□□□ 0.38
NCK1P16333 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NCK1P16333 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.42■□□□□ 0.38
NCK1P16333 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.42■□□□□ 0.38
NCK1P16333 OR6D1P-202ENST00000641007 5290 ntBASIC17.42■□□□□ 0.38
NCK1P16333 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.42■□□□□ 0.38
NCK1P16333 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCK1P16333 FLJ13224-201ENST00000313737 1514 ntBASIC17.42■□□□□ 0.38
NCK1P16333 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.41■□□□□ 0.38
NCK1P16333 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NCK1P16333 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NCK1P16333 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 AC099343.3-201ENST00000605834 2503 ntBASIC17.41■□□□□ 0.38
NCK1P16333 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NCK1P16333 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.41■□□□□ 0.38
NCK1P16333 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.41■□□□□ 0.38
NCK1P16333 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.41■□□□□ 0.38
NCK1P16333 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
NCK1P16333 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NCK1P16333 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.41■□□□□ 0.38
NCK1P16333 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.41■□□□□ 0.38
NCK1P16333 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.41■□□□□ 0.38
NCK1P16333 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.41■□□□□ 0.38
NCK1P16333 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.41■□□□□ 0.38
NCK1P16333 PP12613-201ENST00000424958 2230 ntBASIC17.41■□□□□ 0.38
NCK1P16333 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
NCK1P16333 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NCK1P16333 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 AL096828.2-201ENST00000567259 1965 ntBASIC17.4■□□□□ 0.38
NCK1P16333 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NCK1P16333 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NCK1P16333 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
NCK1P16333 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NCK1P16333 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.4■□□□□ 0.38
NCK1P16333 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.4■□□□□ 0.38
NCK1P16333 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.4■□□□□ 0.38
NCK1P16333 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.4■□□□□ 0.38
NCK1P16333 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NCK1P16333 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.4■□□□□ 0.38
NCK1P16333 AC108860.2-201ENST00000562760 2183 ntBASIC17.4■□□□□ 0.38
NCK1P16333 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.4■□□□□ 0.38
NCK1P16333 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NCK1P16333 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms