Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PDGFRAP16234 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 BX664615.1-201ENST00000443558 458 ntBASIC19.33■□□□□ 0.68
PDGFRAP16234 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.33■□□□□ 0.68
PDGFRAP16234 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
PDGFRAP16234 AC104390.1-201ENST00000555663 520 ntBASIC19.33■□□□□ 0.68
PDGFRAP16234 AL049597.2-201ENST00000565575 961 ntBASIC19.33■□□□□ 0.68
PDGFRAP16234 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.33■□□□□ 0.68
PDGFRAP16234 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PDGFRAP16234 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.33■□□□□ 0.68
PDGFRAP16234 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.33■□□□□ 0.68
PDGFRAP16234 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PDGFRAP16234 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.33■□□□□ 0.68
PDGFRAP16234 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PDGFRAP16234 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.33■□□□□ 0.68
PDGFRAP16234 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.32■□□□□ 0.68
PDGFRAP16234 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.32■□□□□ 0.68
PDGFRAP16234 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PDGFRAP16234 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PDGFRAP16234 BICD1-207ENST00000551848 1962 ntBASIC19.32■□□□□ 0.68
PDGFRAP16234 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.32■□□□□ 0.68
PDGFRAP16234 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.32■□□□□ 0.68
PDGFRAP16234 NEK4P2-201ENST00000580004 1012 ntBASIC19.32■□□□□ 0.68
PDGFRAP16234 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.32■□□□□ 0.68
PDGFRAP16234 AC024243.1-201ENST00000609234 778 ntBASIC19.32■□□□□ 0.68
PDGFRAP16234 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.32■□□□□ 0.68
PDGFRAP16234 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.32■□□□□ 0.68
PDGFRAP16234 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PDGFRAP16234 AC135050.7-201ENST00000624508 2218 ntBASIC19.32■□□□□ 0.68
PDGFRAP16234 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PDGFRAP16234 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDGFRAP16234 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.32■□□□□ 0.68
PDGFRAP16234 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
PDGFRAP16234 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PDGFRAP16234 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.31■□□□□ 0.68
PDGFRAP16234 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PDGFRAP16234 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.31■□□□□ 0.68
PDGFRAP16234 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.31■□□□□ 0.68
PDGFRAP16234 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.31■□□□□ 0.68
PDGFRAP16234 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.31■□□□□ 0.68
PDGFRAP16234 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.31■□□□□ 0.68
PDGFRAP16234 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PDGFRAP16234 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.31■□□□□ 0.68
PDGFRAP16234 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.31■□□□□ 0.68
PDGFRAP16234 AC117947.1-201ENST00000427448 529 ntBASIC19.31■□□□□ 0.68
PDGFRAP16234 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 DUX4L26-201ENST00000489078 1255 ntBASIC19.31■□□□□ 0.68
PDGFRAP16234 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PDGFRAP16234 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.31■□□□□ 0.68
PDGFRAP16234 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 AC139887.4-201ENST00000607877 719 ntBASIC19.31■□□□□ 0.68
PDGFRAP16234 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDGFRAP16234 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PDGFRAP16234 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms