Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPRP12270 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.23■□□□□ 0.35
TPRP12270 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TPRP12270 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.22■□□□□ 0.35
TPRP12270 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
TPRP12270 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.22■□□□□ 0.35
TPRP12270 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.22■□□□□ 0.35
TPRP12270 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.22■□□□□ 0.35
TPRP12270 AL031432.2-201ENST00000566714 459 ntBASIC17.22■□□□□ 0.35
TPRP12270 AL928711.1-201ENST00000570165 459 ntBASIC17.22■□□□□ 0.35
TPRP12270 LINC00628-201ENST00000628516 1289 ntBASIC17.22■□□□□ 0.35
TPRP12270 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.22■□□□□ 0.35
TPRP12270 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.22■□□□□ 0.35
TPRP12270 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TPRP12270 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 AP001271.2-201ENST00000624018 1556 ntBASIC17.22■□□□□ 0.35
TPRP12270 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TPRP12270 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.22■□□□□ 0.35
TPRP12270 AC025678.2-201ENST00000562061 970 ntBASIC17.22■□□□□ 0.35
TPRP12270 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.22■□□□□ 0.35
TPRP12270 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TPRP12270 NKAPP1-205ENST00000585790 367 ntBASIC17.22■□□□□ 0.35
TPRP12270 AC092902.6-201ENST00000641783 218 ntBASIC17.22■□□□□ 0.35
TPRP12270 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TPRP12270 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TPRP12270 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.21■□□□□ 0.35
TPRP12270 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPRP12270 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TPRP12270 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPRP12270 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.21■□□□□ 0.35
TPRP12270 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TPRP12270 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPRP12270 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPRP12270 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPRP12270 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TPRP12270 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TPRP12270 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.21■□□□□ 0.35
TPRP12270 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.21■□□□□ 0.35
TPRP12270 AC109322.1-201ENST00000524499 1264 ntBASIC17.21■□□□□ 0.35
TPRP12270 AC027307.3-201ENST00000594262 1100 ntBASIC17.21■□□□□ 0.35
TPRP12270 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.21■□□□□ 0.35
TPRP12270 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPRP12270 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TPRP12270 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TPRP12270 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TPRP12270 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TPRP12270 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TPRP12270 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TPRP12270 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.21■□□□□ 0.34
TPRP12270 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.21■□□□□ 0.34
TPRP12270 HCG4B-203ENST00000450128 991 ntBASIC17.21■□□□□ 0.34
TPRP12270 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TPRP12270 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TPRP12270 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TPRP12270 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
TPRP12270 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.2■□□□□ 0.34
TPRP12270 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TPRP12270 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.2■□□□□ 0.34
TPRP12270 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.2■□□□□ 0.34
TPRP12270 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.2■□□□□ 0.34
TPRP12270 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TPRP12270 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.2■□□□□ 0.34
TPRP12270 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.2■□□□□ 0.34
TPRP12270 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.2■□□□□ 0.34
TPRP12270 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.2■□□□□ 0.34
TPRP12270 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.2■□□□□ 0.34
TPRP12270 AC064836.3-201ENST00000607928 673 ntBASIC17.2■□□□□ 0.34
TPRP12270 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
TPRP12270 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TPRP12270 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 LINC00565-201ENST00000562710 2331 ntBASIC17.2■□□□□ 0.34
TPRP12270 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.2■□□□□ 0.34
TPRP12270 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TPRP12270 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TPRP12270 INTS4P1-201ENST00000438455 1935 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms