Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND1P03886 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND1P03886 AC004264.1-201ENST00000608354 794 ntBASIC17.4■□□□□ 0.38
MT-ND1P03886 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.4■□□□□ 0.38
MT-ND1P03886 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.4■□□□□ 0.38
MT-ND1P03886 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MT-ND1P03886 KRT8P41-201ENST00000533985 1514 ntBASIC17.4■□□□□ 0.38
MT-ND1P03886 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND1P03886 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.4■□□□□ 0.38
MT-ND1P03886 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND1P03886 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MT-ND1P03886 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.4■□□□□ 0.38
MT-ND1P03886 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND1P03886 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND1P03886 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND1P03886 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND1P03886 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND1P03886 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.4■□□□□ 0.38
MT-ND1P03886 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-ND1P03886 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MT-ND1P03886 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.39■□□□□ 0.38
MT-ND1P03886 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MT-ND1P03886 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.39■□□□□ 0.37
MT-ND1P03886 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.39■□□□□ 0.37
MT-ND1P03886 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.39■□□□□ 0.37
MT-ND1P03886 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.39■□□□□ 0.37
MT-ND1P03886 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.39■□□□□ 0.37
MT-ND1P03886 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.39■□□□□ 0.37
MT-ND1P03886 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
MT-ND1P03886 RNA5SP413-201ENST00000516373 109 ntBASIC17.39■□□□□ 0.37
MT-ND1P03886 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 AL645608.8-201ENST00000606034 2086 ntBASIC17.39■□□□□ 0.37
MT-ND1P03886 AL357033.4-201ENST00000617703 1807 ntBASIC17.39■□□□□ 0.37
MT-ND1P03886 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.39■□□□□ 0.37
MT-ND1P03886 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.39■□□□□ 0.37
MT-ND1P03886 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
MT-ND1P03886 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-ND1P03886 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 AC012317.2-201ENST00000623305 2251 ntBASIC17.38■□□□□ 0.37
MT-ND1P03886 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MT-ND1P03886 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
MT-ND1P03886 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MT-ND1P03886 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MT-ND1P03886 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
MT-ND1P03886 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MT-ND1P03886 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 ID1-201ENST00000376105 1233 ntBASIC17.38■□□□□ 0.37
MT-ND1P03886 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
MT-ND1P03886 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.38■□□□□ 0.37
MT-ND1P03886 C1QL1P1-201ENST00000568105 661 ntBASIC17.38■□□□□ 0.37
MT-ND1P03886 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.38■□□□□ 0.37
MT-ND1P03886 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.38■□□□□ 0.37
MT-ND1P03886 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
MT-ND1P03886 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MT-ND1P03886 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-ND1P03886 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
MT-ND1P03886 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-ND1P03886 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.37■□□□□ 0.37
MT-ND1P03886 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
MT-ND1P03886 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
MT-ND1P03886 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms