Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX4O95219 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX4O95219 AC141586.3-201ENST00000562166 1838 ntBASIC17.31■□□□□ 0.36
SNX4O95219 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX4O95219 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SNX4O95219 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX4O95219 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX4O95219 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX4O95219 INGX-201ENST00000359239 846 ntBASIC17.31■□□□□ 0.36
SNX4O95219 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SNX4O95219 AC005521.1-201ENST00000393351 872 ntBASIC17.31■□□□□ 0.36
SNX4O95219 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SNX4O95219 ATP5G1P1-201ENST00000448724 379 ntBASIC17.31■□□□□ 0.36
SNX4O95219 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX4O95219 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX4O95219 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.31■□□□□ 0.36
SNX4O95219 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX4O95219 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX4O95219 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
SNX4O95219 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SNX4O95219 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SNX4O95219 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SNX4O95219 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX4O95219 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX4O95219 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 FEM1AP3-201ENST00000403722 1741 ntBASIC17.3■□□□□ 0.36
SNX4O95219 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX4O95219 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SNX4O95219 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 TERF1P1-201ENST00000311003 1181 ntBASIC17.3■□□□□ 0.36
SNX4O95219 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SNX4O95219 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.3■□□□□ 0.36
SNX4O95219 KRT18P21-201ENST00000515767 1272 ntBASIC17.3■□□□□ 0.36
SNX4O95219 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX4O95219 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
SNX4O95219 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SNX4O95219 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.3■□□□□ 0.36
SNX4O95219 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX4O95219 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.29■□□□□ 0.36
SNX4O95219 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SNX4O95219 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX4O95219 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.29■□□□□ 0.36
SNX4O95219 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 RCN1P1-201ENST00000400413 996 ntBASIC17.29■□□□□ 0.36
SNX4O95219 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.29■□□□□ 0.36
SNX4O95219 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 AP003041.3-201ENST00000527151 707 ntBASIC17.29■□□□□ 0.36
SNX4O95219 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.29■□□□□ 0.36
SNX4O95219 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
SNX4O95219 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SNX4O95219 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SNX4O95219 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX4O95219 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX4O95219 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX4O95219 KRT8P3-201ENST00000519669 1449 ntBASIC17.29■□□□□ 0.36
SNX4O95219 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SNX4O95219 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX4O95219 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX4O95219 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SNX4O95219 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX4O95219 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms