Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC24.35■■□□□ 1.49
LTN1O94822 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LTN1O94822 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC24.35■■□□□ 1.49
LTN1O94822 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
LTN1O94822 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LTN1O94822 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
LTN1O94822 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LTN1O94822 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC24.34■■□□□ 1.49
LTN1O94822 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
LTN1O94822 HIST2H3DP1-201ENST00000401004 416 ntBASIC24.34■■□□□ 1.49
LTN1O94822 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC24.34■■□□□ 1.49
LTN1O94822 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC24.34■■□□□ 1.49
LTN1O94822 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC24.34■■□□□ 1.49
LTN1O94822 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC24.34■■□□□ 1.49
LTN1O94822 AC009154.2-201ENST00000621177 724 ntBASIC24.34■■□□□ 1.49
LTN1O94822 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
LTN1O94822 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC24.34■■□□□ 1.49
LTN1O94822 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LTN1O94822 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LTN1O94822 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LTN1O94822 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC24.34■■□□□ 1.49
LTN1O94822 RNPS1P1-201ENST00000507437 918 ntBASIC24.34■■□□□ 1.49
LTN1O94822 AC106730.1-201ENST00000566722 1090 ntBASIC24.34■■□□□ 1.49
LTN1O94822 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LTN1O94822 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC24.34■■□□□ 1.49
LTN1O94822 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC24.34■■□□□ 1.49
LTN1O94822 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
LTN1O94822 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
LTN1O94822 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
LTN1O94822 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
LTN1O94822 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LTN1O94822 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC24.33■■□□□ 1.49
LTN1O94822 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
LTN1O94822 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC24.33■■□□□ 1.49
LTN1O94822 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
LTN1O94822 RCN1P2-201ENST00000398357 915 ntBASIC24.33■■□□□ 1.49
LTN1O94822 MIR5100-201ENST00000579544 119 ntBASIC24.33■■□□□ 1.49
LTN1O94822 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
LTN1O94822 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
LTN1O94822 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
LTN1O94822 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
LTN1O94822 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
LTN1O94822 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
LTN1O94822 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LTN1O94822 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LTN1O94822 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
LTN1O94822 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LTN1O94822 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LTN1O94822 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
LTN1O94822 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC24.32■■□□□ 1.48
LTN1O94822 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC24.32■■□□□ 1.48
LTN1O94822 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC24.32■■□□□ 1.48
LTN1O94822 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LTN1O94822 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC24.32■■□□□ 1.48
LTN1O94822 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LTN1O94822 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LTN1O94822 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC24.32■■□□□ 1.48
LTN1O94822 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.32■■□□□ 1.48
LTN1O94822 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
LTN1O94822 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LTN1O94822 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
LTN1O94822 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LTN1O94822 KRT18P13-201ENST00000400056 1290 ntBASIC24.31■■□□□ 1.48
LTN1O94822 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
LTN1O94822 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC24.31■■□□□ 1.48
LTN1O94822 AC012640.2-201ENST00000561606 901 ntBASIC24.31■■□□□ 1.48
LTN1O94822 AC008687.5-201ENST00000593746 558 ntBASIC24.31■■□□□ 1.48
LTN1O94822 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC24.31■■□□□ 1.48
LTN1O94822 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.31■■□□□ 1.48
LTN1O94822 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LTN1O94822 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
LTN1O94822 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LTN1O94822 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LTN1O94822 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LTN1O94822 MED16-201ENST00000269814 1199 ntTSL 5 BASIC24.31■■□□□ 1.48
LTN1O94822 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
LTN1O94822 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC24.31■■□□□ 1.48
LTN1O94822 PGAM5P1-201ENST00000518923 814 ntBASIC24.31■■□□□ 1.48
LTN1O94822 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
LTN1O94822 CYGB-205ENST00000590175 830 ntTSL 3 BASIC24.31■■□□□ 1.48
LTN1O94822 MTDHP3-201ENST00000594186 672 ntBASIC24.31■■□□□ 1.48
LTN1O94822 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC24.31■■□□□ 1.48
LTN1O94822 AC005082.1-201ENST00000413042 2259 ntBASIC24.31■■□□□ 1.48
LTN1O94822 AP005117.1-201ENST00000584346 1413 ntBASIC24.31■■□□□ 1.48
LTN1O94822 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LTN1O94822 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LTN1O94822 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LTN1O94822 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LTN1O94822 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LTN1O94822 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LTN1O94822 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC24.3■■□□□ 1.48
LTN1O94822 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
LTN1O94822 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC24.3■■□□□ 1.48
LTN1O94822 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LTN1O94822 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC24.3■■□□□ 1.48
LTN1O94822 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC24.3■■□□□ 1.48
LTN1O94822 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC24.3■■□□□ 1.48
LTN1O94822 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC24.3■■□□□ 1.48
LTN1O94822 AC011467.2-201ENST00000598425 242 ntBASIC24.3■■□□□ 1.48
LTN1O94822 AC139530.3-201ENST00000620344 690 ntBASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms