Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 LINC01126-201ENST00000623515 1646 ntBASIC17.72■□□□□ 0.43
PRAMEF4O60810 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 AC010240.3-201ENST00000607688 395 ntBASIC17.72■□□□□ 0.43
PRAMEF4O60810 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 AC097493.4-201ENST00000641197 219 ntBASIC17.72■□□□□ 0.43
PRAMEF4O60810 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEF4O60810 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEF4O60810 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
PRAMEF4O60810 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEF4O60810 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
PRAMEF4O60810 SLC25A3P1-201ENST00000443844 931 ntBASIC17.71■□□□□ 0.43
PRAMEF4O60810 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.71■□□□□ 0.43
PRAMEF4O60810 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.71■□□□□ 0.43
PRAMEF4O60810 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEF4O60810 AC073912.3-201ENST00000624414 853 ntBASIC17.71■□□□□ 0.43
PRAMEF4O60810 AC133561.5-201ENST00000635547 218 ntBASIC17.71■□□□□ 0.43
PRAMEF4O60810 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.71■□□□□ 0.43
PRAMEF4O60810 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.71■□□□□ 0.43
PRAMEF4O60810 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PRAMEF4O60810 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRAMEF4O60810 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.71■□□□□ 0.42
PRAMEF4O60810 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
PRAMEF4O60810 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PRAMEF4O60810 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 REXO1L9P-201ENST00000604264 2108 ntBASIC17.7■□□□□ 0.42
PRAMEF4O60810 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 AC141257.4-201ENST00000634557 245 ntBASIC17.7■□□□□ 0.42
PRAMEF4O60810 AC136944.6-201ENST00000634818 245 ntBASIC17.7■□□□□ 0.42
PRAMEF4O60810 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.7■□□□□ 0.42
PRAMEF4O60810 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 GMCL1P1-201ENST00000463439 1581 ntBASIC17.7■□□□□ 0.42
PRAMEF4O60810 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PRAMEF4O60810 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEF4O60810 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms