Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CYTIPO60759 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CYTIPO60759 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CYTIPO60759 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.42■□□□□ 0.22
CYTIPO60759 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.42■□□□□ 0.22
CYTIPO60759 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.42■□□□□ 0.22
CYTIPO60759 PVRIG2P-201ENST00000435460 978 ntBASIC16.42■□□□□ 0.22
CYTIPO60759 AL671277.2-201ENST00000458060 996 ntBASIC16.42■□□□□ 0.22
CYTIPO60759 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.42■□□□□ 0.22
CYTIPO60759 KRT18P35-201ENST00000510488 1269 ntBASIC16.42■□□□□ 0.22
CYTIPO60759 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.42■□□□□ 0.22
CYTIPO60759 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.42■□□□□ 0.22
CYTIPO60759 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.42■□□□□ 0.22
CYTIPO60759 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.42■□□□□ 0.22
CYTIPO60759 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.42■□□□□ 0.22
CYTIPO60759 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CYTIPO60759 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.42■□□□□ 0.22
CYTIPO60759 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CYTIPO60759 AC009102.3-201ENST00000623118 1491 ntBASIC16.42■□□□□ 0.22
CYTIPO60759 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYTIPO60759 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CYTIPO60759 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CYTIPO60759 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.41■□□□□ 0.22
CYTIPO60759 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.41■□□□□ 0.22
CYTIPO60759 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYTIPO60759 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYTIPO60759 AL138781.2-201ENST00000617896 1843 ntBASIC16.41■□□□□ 0.22
CYTIPO60759 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYTIPO60759 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.41■□□□□ 0.22
CYTIPO60759 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.41■□□□□ 0.22
CYTIPO60759 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYTIPO60759 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.41■□□□□ 0.22
CYTIPO60759 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYTIPO60759 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.41■□□□□ 0.22
CYTIPO60759 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.41■□□□□ 0.22
CYTIPO60759 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.41■□□□□ 0.22
CYTIPO60759 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.41■□□□□ 0.22
CYTIPO60759 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.41■□□□□ 0.22
CYTIPO60759 HYMAI.1-201ENST00000620949 238 ntBASIC16.41■□□□□ 0.22
CYTIPO60759 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.41■□□□□ 0.22
CYTIPO60759 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CYTIPO60759 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.41■□□□□ 0.22
CYTIPO60759 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYTIPO60759 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.41■□□□□ 0.22
CYTIPO60759 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CYTIPO60759 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CYTIPO60759 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CYTIPO60759 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CYTIPO60759 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.4■□□□□ 0.22
CYTIPO60759 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CYTIPO60759 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 LINC01311-201ENST00000565162 1445 ntBASIC16.4■□□□□ 0.22
CYTIPO60759 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 HBZP1-201ENST00000354915 429 ntBASIC16.4■□□□□ 0.22
CYTIPO60759 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.4■□□□□ 0.22
CYTIPO60759 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.4■□□□□ 0.22
CYTIPO60759 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.4■□□□□ 0.22
CYTIPO60759 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.4■□□□□ 0.22
CYTIPO60759 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CYTIPO60759 AL445228.2-201ENST00000605589 952 ntBASIC16.4■□□□□ 0.22
CYTIPO60759 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 AC079602.3-201ENST00000623931 403 ntBASIC16.4■□□□□ 0.22
CYTIPO60759 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.4■□□□□ 0.22
CYTIPO60759 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.4■□□□□ 0.22
CYTIPO60759 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CYTIPO60759 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CYTIPO60759 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CYTIPO60759 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CYTIPO60759 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYTIPO60759 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CYTIPO60759 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYTIPO60759 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CYTIPO60759 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms