Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.36■□□□□ 0.37
PLOD3O60568 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.36■□□□□ 0.37
PLOD3O60568 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PLOD3O60568 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.36■□□□□ 0.37
PLOD3O60568 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.36■□□□□ 0.37
PLOD3O60568 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.36■□□□□ 0.37
PLOD3O60568 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PLOD3O60568 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.36■□□□□ 0.37
PLOD3O60568 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.36■□□□□ 0.37
PLOD3O60568 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.36■□□□□ 0.37
PLOD3O60568 FAM87A-204ENST00000613235 858 ntBASIC17.36■□□□□ 0.37
PLOD3O60568 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.36■□□□□ 0.37
PLOD3O60568 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.36■□□□□ 0.37
PLOD3O60568 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 AC090164.3-201ENST00000610780 2143 ntBASIC17.36■□□□□ 0.37
PLOD3O60568 HOXB1-202ENST00000577092 1414 ntBASIC17.36■□□□□ 0.37
PLOD3O60568 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PLOD3O60568 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
PLOD3O60568 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PLOD3O60568 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PLOD3O60568 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 AC126763.1-201ENST00000552015 2118 ntBASIC17.35■□□□□ 0.37
PLOD3O60568 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PLOD3O60568 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PLOD3O60568 AC087499.1-201ENST00000418141 1075 ntBASIC17.35■□□□□ 0.37
PLOD3O60568 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.35■□□□□ 0.37
PLOD3O60568 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.35■□□□□ 0.37
PLOD3O60568 AL512604.3-201ENST00000569583 964 ntBASIC17.35■□□□□ 0.37
PLOD3O60568 KRT18P22-201ENST00000402024 1347 ntBASIC17.35■□□□□ 0.37
PLOD3O60568 LINC01568-207ENST00000641790 1380 ntBASIC17.35■□□□□ 0.37
PLOD3O60568 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.35■□□□□ 0.37
PLOD3O60568 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
PLOD3O60568 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.35■□□□□ 0.37
PLOD3O60568 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.35■□□□□ 0.37
PLOD3O60568 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PLOD3O60568 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.34■□□□□ 0.37
PLOD3O60568 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.34■□□□□ 0.37
PLOD3O60568 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 HMGA1P5-201ENST00000412453 271 ntBASIC17.34■□□□□ 0.37
PLOD3O60568 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.34■□□□□ 0.37
PLOD3O60568 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.34■□□□□ 0.37
PLOD3O60568 MYLKP1-201ENST00000509077 1580 ntBASIC17.34■□□□□ 0.37
PLOD3O60568 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.34■□□□□ 0.37
PLOD3O60568 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.34■□□□□ 0.37
PLOD3O60568 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.34■□□□□ 0.37
PLOD3O60568 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
PLOD3O60568 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.34■□□□□ 0.37
PLOD3O60568 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PLOD3O60568 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.34■□□□□ 0.37
PLOD3O60568 AC145285.6-201ENST00000604632 637 ntBASIC17.34■□□□□ 0.37
PLOD3O60568 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PLOD3O60568 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.34■□□□□ 0.37
PLOD3O60568 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
PLOD3O60568 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.33■□□□□ 0.37
PLOD3O60568 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms