Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VEGFDO43915 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.04■□□□□ 0.48
VEGFDO43915 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VEGFDO43915 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VEGFDO43915 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VEGFDO43915 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VEGFDO43915 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VEGFDO43915 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.03■□□□□ 0.48
VEGFDO43915 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
VEGFDO43915 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.03■□□□□ 0.48
VEGFDO43915 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.03■□□□□ 0.48
VEGFDO43915 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.03■□□□□ 0.48
VEGFDO43915 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.03■□□□□ 0.48
VEGFDO43915 AC011498.5-201ENST00000592027 486 ntBASIC18.03■□□□□ 0.48
VEGFDO43915 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.03■□□□□ 0.48
VEGFDO43915 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VEGFDO43915 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 GMCL1P1-201ENST00000463439 1581 ntBASIC18.03■□□□□ 0.48
VEGFDO43915 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 AL024508.2-201ENST00000607749 1894 ntBASIC18.03■□□□□ 0.48
VEGFDO43915 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VEGFDO43915 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.02■□□□□ 0.48
VEGFDO43915 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.02■□□□□ 0.48
VEGFDO43915 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.02■□□□□ 0.48
VEGFDO43915 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VEGFDO43915 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VEGFDO43915 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
VEGFDO43915 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VEGFDO43915 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VEGFDO43915 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.02■□□□□ 0.48
VEGFDO43915 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VEGFDO43915 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.02■□□□□ 0.48
VEGFDO43915 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VEGFDO43915 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VEGFDO43915 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.02■□□□□ 0.48
VEGFDO43915 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.02■□□□□ 0.48
VEGFDO43915 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.02■□□□□ 0.48
VEGFDO43915 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
VEGFDO43915 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.02■□□□□ 0.48
VEGFDO43915 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VEGFDO43915 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.02■□□□□ 0.48
VEGFDO43915 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.02■□□□□ 0.48
VEGFDO43915 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.02■□□□□ 0.48
VEGFDO43915 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.02■□□□□ 0.48
VEGFDO43915 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.02■□□□□ 0.48
VEGFDO43915 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
VEGFDO43915 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VEGFDO43915 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
VEGFDO43915 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.01■□□□□ 0.47
VEGFDO43915 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
VEGFDO43915 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VEGFDO43915 AC005082.1-201ENST00000413042 2259 ntBASIC18.01■□□□□ 0.47
VEGFDO43915 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
VEGFDO43915 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.01■□□□□ 0.47
VEGFDO43915 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.01■□□□□ 0.47
VEGFDO43915 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
VEGFDO43915 AC113404.2-201ENST00000507884 177 ntBASIC18.01■□□□□ 0.47
VEGFDO43915 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.01■□□□□ 0.47
VEGFDO43915 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.01■□□□□ 0.47
VEGFDO43915 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.01■□□□□ 0.47
VEGFDO43915 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.01■□□□□ 0.47
VEGFDO43915 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.01■□□□□ 0.47
VEGFDO43915 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
VEGFDO43915 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
VEGFDO43915 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.01■□□□□ 0.47
VEGFDO43915 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.01■□□□□ 0.47
VEGFDO43915 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.01■□□□□ 0.47
VEGFDO43915 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VEGFDO43915 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.01■□□□□ 0.47
VEGFDO43915 AC004408.2-201ENST00000623613 2777 ntBASIC18.01■□□□□ 0.47
VEGFDO43915 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VEGFDO43915 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
VEGFDO43915 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms