Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.1■□□□□ 0.65
MSI1O43347 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MSI1O43347 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.1■□□□□ 0.65
MSI1O43347 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MSI1O43347 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.1■□□□□ 0.65
MSI1O43347 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
MSI1O43347 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.1■□□□□ 0.65
MSI1O43347 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.1■□□□□ 0.65
MSI1O43347 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.1■□□□□ 0.65
MSI1O43347 AC091076.1-201ENST00000610741 619 ntBASIC19.1■□□□□ 0.65
MSI1O43347 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
MSI1O43347 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.1■□□□□ 0.65
MSI1O43347 AC116407.4-201ENST00000623319 1061 ntBASIC19.1■□□□□ 0.65
MSI1O43347 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.1■□□□□ 0.65
MSI1O43347 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.1■□□□□ 0.65
MSI1O43347 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.1■□□□□ 0.65
MSI1O43347 AL162741.1-201ENST00000565563 1558 ntBASIC19.1■□□□□ 0.65
MSI1O43347 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MSI1O43347 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MSI1O43347 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.1■□□□□ 0.65
MSI1O43347 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.09■□□□□ 0.65
MSI1O43347 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
MSI1O43347 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MSI1O43347 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.09■□□□□ 0.65
MSI1O43347 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.09■□□□□ 0.65
MSI1O43347 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.09■□□□□ 0.65
MSI1O43347 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.09■□□□□ 0.65
MSI1O43347 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.09■□□□□ 0.65
MSI1O43347 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.09■□□□□ 0.65
MSI1O43347 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.09■□□□□ 0.65
MSI1O43347 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.09■□□□□ 0.65
MSI1O43347 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSI1O43347 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
MSI1O43347 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.08■□□□□ 0.65
MSI1O43347 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MSI1O43347 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MSI1O43347 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSI1O43347 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSI1O43347 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSI1O43347 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MSI1O43347 MIR662-201ENST00000384847 95 ntBASIC19.08■□□□□ 0.64
MSI1O43347 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
MSI1O43347 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.08■□□□□ 0.64
MSI1O43347 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.08■□□□□ 0.64
MSI1O43347 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSI1O43347 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.08■□□□□ 0.64
MSI1O43347 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.08■□□□□ 0.64
MSI1O43347 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.08■□□□□ 0.64
MSI1O43347 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSI1O43347 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
MSI1O43347 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSI1O43347 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSI1O43347 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSI1O43347 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MSI1O43347 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.07■□□□□ 0.64
MSI1O43347 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.07■□□□□ 0.64
MSI1O43347 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.07■□□□□ 0.64
MSI1O43347 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
MSI1O43347 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSI1O43347 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSI1O43347 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSI1O43347 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
MSI1O43347 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.07■□□□□ 0.64
MSI1O43347 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSI1O43347 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.07■□□□□ 0.64
MSI1O43347 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MSI1O43347 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MSI1O43347 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSI1O43347 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.07■□□□□ 0.64
MSI1O43347 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSI1O43347 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSI1O43347 UPK3BP1-201ENST00000428678 509 ntBASIC19.07■□□□□ 0.64
MSI1O43347 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms