Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRTM2O43300 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.23■□□□□ 0.35
LRRTM2O43300 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRTM2O43300 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.23■□□□□ 0.35
LRRTM2O43300 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM2O43300 AC008622.2-201ENST00000617006 1229 ntBASIC17.23■□□□□ 0.35
LRRTM2O43300 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM2O43300 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM2O43300 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRRTM2O43300 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRTM2O43300 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM2O43300 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRRTM2O43300 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRTM2O43300 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM2O43300 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM2O43300 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM2O43300 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM2O43300 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM2O43300 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM2O43300 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRTM2O43300 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRTM2O43300 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRTM2O43300 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRTM2O43300 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM2O43300 AC141586.3-201ENST00000562166 1838 ntBASIC17.22■□□□□ 0.35
LRRTM2O43300 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRTM2O43300 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.22■□□□□ 0.35
LRRTM2O43300 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRTM2O43300 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.22■□□□□ 0.35
LRRTM2O43300 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRTM2O43300 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRTM2O43300 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
LRRTM2O43300 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.22■□□□□ 0.35
LRRTM2O43300 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LRRTM2O43300 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LRRTM2O43300 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM2O43300 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRTM2O43300 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRTM2O43300 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LRRTM2O43300 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LRRTM2O43300 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRTM2O43300 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRTM2O43300 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRTM2O43300 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRTM2O43300 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRTM2O43300 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRTM2O43300 CA15P1-201ENST00000481698 905 ntBASIC17.21■□□□□ 0.35
LRRTM2O43300 AP003041.3-201ENST00000527151 707 ntBASIC17.21■□□□□ 0.35
LRRTM2O43300 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRTM2O43300 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRTM2O43300 AL136038.3-201ENST00000561909 1096 ntBASIC17.21■□□□□ 0.35
LRRTM2O43300 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRTM2O43300 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRTM2O43300 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRTM2O43300 AC090164.3-201ENST00000610780 2143 ntBASIC17.21■□□□□ 0.35
LRRTM2O43300 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
LRRTM2O43300 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LRRTM2O43300 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRTM2O43300 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM2O43300 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM2O43300 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRTM2O43300 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRTM2O43300 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM2O43300 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM2O43300 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRTM2O43300 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms