Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01548A6NM66 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LINC01548A6NM66 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LINC01548A6NM66 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LINC01548A6NM66 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01548A6NM66 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01548A6NM66 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC01548A6NM66 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.52□□□□□ -0.08
LINC01548A6NM66 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01548A6NM66 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
LINC01548A6NM66 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01548A6NM66 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC01548A6NM66 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01548A6NM66 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 FAM86EP-206ENST00000510506 987 ntBASIC14.52□□□□□ -0.09
LINC01548A6NM66 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 VENTXP5-201ENST00000523979 775 ntBASIC14.52□□□□□ -0.09
LINC01548A6NM66 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 ZNF444P1-201ENST00000559497 298 ntBASIC14.52□□□□□ -0.09
LINC01548A6NM66 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 AL138781.2-201ENST00000617896 1843 ntBASIC14.52□□□□□ -0.09
LINC01548A6NM66 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01548A6NM66 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01548A6NM66 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 HLA-F-220ENST00000434407 884 ntBASIC14.51□□□□□ -0.09
LINC01548A6NM66 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 MIR3180-4-201ENST00000582223 153 ntBASIC14.51□□□□□ -0.09
LINC01548A6NM66 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 AL136038.4-201ENST00000603606 1261 ntBASIC14.51□□□□□ -0.09
LINC01548A6NM66 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01548A6NM66 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LINC01548A6NM66 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC01548A6NM66 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01548A6NM66 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms