Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 UPF3AP3-201ENST00000420996 769 ntBASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 MED15P5-201ENST00000423150 992 ntBASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 AC098831.1-202ENST00000438821 336 ntBASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 AL591424.1-201ENST00000442569 1213 ntBASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 NMU-202ENST00000505262 693 ntTSL 3 BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 OR7E14P-202ENST00000530490 1290 ntBASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PLEKHD1A6NEE1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 AC092910.1-201ENST00000482027 1129 ntBASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 AL356309.3-201ENST00000624132 1934 ntBASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
PLEKHD1A6NEE1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 AC025062.2-201ENST00000605477 670 ntBASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PLEKHD1A6NEE1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 RPSAP43-201ENST00000402237 625 ntBASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 RNA5SP415-201ENST00000517246 115 ntBASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 Z83851.2-201ENST00000609564 659 ntBASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PLEKHD1A6NEE1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 AL158211.5-201ENST00000623583 2518 ntBASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC28.22■■■□□ 2.11
PLEKHD1A6NEE1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms