Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 KRT8P47-201ENST00000604727 1398 ntBASIC23.18■■□□□ 1.3
LAMB4A4D0S4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LAMB4A4D0S4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LAMB4A4D0S4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
LAMB4A4D0S4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LAMB4A4D0S4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LAMB4A4D0S4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC23.18■■□□□ 1.3
LAMB4A4D0S4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 AC093010.1-201ENST00000473625 1624 ntBASIC23.17■■□□□ 1.3
LAMB4A4D0S4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.17■■□□□ 1.3
LAMB4A4D0S4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LAMB4A4D0S4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 KRT18P67-201ENST00000432816 1264 ntBASIC23.15■■□□□ 1.3
LAMB4A4D0S4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 AP001005.1-201ENST00000571755 1248 ntBASIC23.15■■□□□ 1.3
LAMB4A4D0S4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 ESPNP-201ENST00000270691 2015 ntBASIC23.15■■□□□ 1.3
LAMB4A4D0S4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.15■■□□□ 1.3
LAMB4A4D0S4 AC132938.6-201ENST00000623828 1655 ntBASIC23.14■■□□□ 1.3
LAMB4A4D0S4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
LAMB4A4D0S4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.14■■□□□ 1.3
LAMB4A4D0S4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
LAMB4A4D0S4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
LAMB4A4D0S4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
LAMB4A4D0S4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC23.14■■□□□ 1.3
LAMB4A4D0S4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC23.14■■□□□ 1.3
LAMB4A4D0S4 AP001269.4-201ENST00000609611 512 ntBASIC23.14■■□□□ 1.3
LAMB4A4D0S4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
LAMB4A4D0S4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LAMB4A4D0S4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.14■■□□□ 1.29
LAMB4A4D0S4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC23.14■■□□□ 1.29
LAMB4A4D0S4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LAMB4A4D0S4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC23.14■■□□□ 1.29
LAMB4A4D0S4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 FGFR3P6-201ENST00000457012 610 ntBASIC23.13■■□□□ 1.29
LAMB4A4D0S4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
LAMB4A4D0S4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
LAMB4A4D0S4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LAMB4A4D0S4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.12■■□□□ 1.29
LAMB4A4D0S4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LAMB4A4D0S4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
LAMB4A4D0S4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
LAMB4A4D0S4 POM121L3P-201ENST00000419331 1163 ntBASIC23.12■■□□□ 1.29
LAMB4A4D0S4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
LAMB4A4D0S4 AC112698.1-201ENST00000510299 916 ntBASIC23.12■■□□□ 1.29
LAMB4A4D0S4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms