Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.98■□□□□ 0.95
SYCE3A1L190 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.98■□□□□ 0.95
SYCE3A1L190 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.98■□□□□ 0.95
SYCE3A1L190 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.98■□□□□ 0.95
SYCE3A1L190 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.98■□□□□ 0.95
SYCE3A1L190 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
SYCE3A1L190 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SYCE3A1L190 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.98■□□□□ 0.95
SYCE3A1L190 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.98■□□□□ 0.95
SYCE3A1L190 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 AC011676.5-201ENST00000624864 2660 ntBASIC20.98■□□□□ 0.95
SYCE3A1L190 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
SYCE3A1L190 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYCE3A1L190 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.98■□□□□ 0.95
SYCE3A1L190 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.97■□□□□ 0.95
SYCE3A1L190 NKILA-202ENST00000614771 2598 ntBASIC20.97■□□□□ 0.95
SYCE3A1L190 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SYCE3A1L190 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.97■□□□□ 0.95
SYCE3A1L190 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SYCE3A1L190 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.97■□□□□ 0.95
SYCE3A1L190 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.97■□□□□ 0.95
SYCE3A1L190 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 SOX15-203ENST00000570788 1093 ntBASIC20.97■□□□□ 0.95
SYCE3A1L190 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.97■□□□□ 0.95
SYCE3A1L190 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SYCE3A1L190 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.97■□□□□ 0.95
SYCE3A1L190 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SYCE3A1L190 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCE3A1L190 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SYCE3A1L190 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.96■□□□□ 0.95
SYCE3A1L190 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SYCE3A1L190 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.96■□□□□ 0.95
SYCE3A1L190 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
SYCE3A1L190 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SYCE3A1L190 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SYCE3A1L190 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.96■□□□□ 0.95
SYCE3A1L190 Z85996.1-201ENST00000494644 937 ntBASIC20.96■□□□□ 0.95
SYCE3A1L190 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.96■□□□□ 0.95
SYCE3A1L190 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 AC060766.5-201ENST00000590539 871 ntBASIC20.96■□□□□ 0.95
SYCE3A1L190 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
SYCE3A1L190 AC008687.6-201ENST00000596318 630 ntBASIC20.96■□□□□ 0.95
SYCE3A1L190 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SYCE3A1L190 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.96■□□□□ 0.95
SYCE3A1L190 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.96■□□□□ 0.95
SYCE3A1L190 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.96■□□□□ 0.95
SYCE3A1L190 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SYCE3A1L190 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SYCE3A1L190 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SYCE3A1L190 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SYCE3A1L190 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCE3A1L190 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.95■□□□□ 0.94
SYCE3A1L190 PHGDH-209ENST00000641074 1780 ntBASIC20.95■□□□□ 0.94
SYCE3A1L190 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
SYCE3A1L190 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCE3A1L190 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.95■□□□□ 0.94
SYCE3A1L190 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SYCE3A1L190 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCE3A1L190 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCE3A1L190 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SYCE3A1L190 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYCE3A1L190 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SYCE3A1L190 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SYCE3A1L190 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SYCE3A1L190 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms