Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 TERF1P1-201ENST00000311003 1181 ntBASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 AC113347.1-201ENST00000413321 391 ntBASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 AL157888.1-201ENST00000631930 593 ntBASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV5S1A1TA0A578 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
TCRBV5S1A1TA0A578 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 AL023973.1-201ENST00000624619 620 ntBASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 FLJ13224-201ENST00000313737 1514 ntBASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV5S1A1TA0A578 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 AP000523.1-201ENST00000398242 1049 ntBASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 AL441883.1-201ENST00000566170 1045 ntBASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 AC092865.7-201ENST00000641832 219 ntBASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV5S1A1TA0A578 AC018470.1-201ENST00000624790 3129 ntBASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 PVRIG2P-201ENST00000435460 978 ntBASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
TCRBV5S1A1TA0A578 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms