Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
STAG1Q8WVM7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
STAG1Q8WVM7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
STAG1Q8WVM7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
STAG1Q8WVM7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
STAG1Q8WVM7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
STAG1Q8WVM7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.65■■■□□ 2.34
STAG1Q8WVM7 BX255925.1-201ENST00000566954 1854 ntBASIC29.64■■■□□ 2.34
STAG1Q8WVM7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
STAG1Q8WVM7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
STAG1Q8WVM7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
STAG1Q8WVM7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
STAG1Q8WVM7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
STAG1Q8WVM7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
STAG1Q8WVM7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
STAG1Q8WVM7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
STAG1Q8WVM7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.63■■■□□ 2.33
STAG1Q8WVM7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.63■■■□□ 2.33
STAG1Q8WVM7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
STAG1Q8WVM7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.62■■■□□ 2.33
STAG1Q8WVM7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
STAG1Q8WVM7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
STAG1Q8WVM7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
STAG1Q8WVM7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.61■■■□□ 2.33
STAG1Q8WVM7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.61■■■□□ 2.33
STAG1Q8WVM7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
STAG1Q8WVM7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
STAG1Q8WVM7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.6■■■□□ 2.33
STAG1Q8WVM7 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.6■■■□□ 2.33
STAG1Q8WVM7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.6■■■□□ 2.33
STAG1Q8WVM7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
STAG1Q8WVM7 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.6■■■□□ 2.33
STAG1Q8WVM7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
STAG1Q8WVM7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
STAG1Q8WVM7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.59■■■□□ 2.33
STAG1Q8WVM7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
STAG1Q8WVM7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
STAG1Q8WVM7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
STAG1Q8WVM7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
STAG1Q8WVM7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC29.57■■■□□ 2.32
STAG1Q8WVM7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
STAG1Q8WVM7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.56■■■□□ 2.32
STAG1Q8WVM7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
STAG1Q8WVM7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
STAG1Q8WVM7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
STAG1Q8WVM7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.55■■■□□ 2.32
STAG1Q8WVM7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
STAG1Q8WVM7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
STAG1Q8WVM7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
STAG1Q8WVM7 GPX1-201ENST00000419349 1106 ntBASIC29.54■■■□□ 2.32
STAG1Q8WVM7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
STAG1Q8WVM7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.53■■■□□ 2.32
STAG1Q8WVM7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
STAG1Q8WVM7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
STAG1Q8WVM7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
STAG1Q8WVM7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
STAG1Q8WVM7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.51■■■□□ 2.31
STAG1Q8WVM7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
STAG1Q8WVM7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
STAG1Q8WVM7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.49■■■□□ 2.31
STAG1Q8WVM7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.49■■■□□ 2.31
STAG1Q8WVM7 AC060814.1-201ENST00000554326 538 ntBASIC29.49■■■□□ 2.31
STAG1Q8WVM7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
STAG1Q8WVM7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.48■■■□□ 2.31
STAG1Q8WVM7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
STAG1Q8WVM7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.48■■■□□ 2.31
STAG1Q8WVM7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.48■■■□□ 2.31
STAG1Q8WVM7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.48■■■□□ 2.31
STAG1Q8WVM7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
STAG1Q8WVM7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.47■■■□□ 2.31
STAG1Q8WVM7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
STAG1Q8WVM7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
STAG1Q8WVM7 AC126177.7-201ENST00000547904 679 ntBASIC29.46■■■□□ 2.31
STAG1Q8WVM7 AL359258.2-201ENST00000564063 1566 ntBASIC29.46■■■□□ 2.31
STAG1Q8WVM7 WHAMMP3-201ENST00000611636 1609 ntBASIC29.45■■■□□ 2.31
STAG1Q8WVM7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
STAG1Q8WVM7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
STAG1Q8WVM7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
STAG1Q8WVM7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
STAG1Q8WVM7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
STAG1Q8WVM7 AC022413.1-201ENST00000624602 984 ntBASIC29.45■■■□□ 2.31
STAG1Q8WVM7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
STAG1Q8WVM7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
STAG1Q8WVM7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
STAG1Q8WVM7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.43■■■□□ 2.3
STAG1Q8WVM7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
STAG1Q8WVM7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
STAG1Q8WVM7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.43■■■□□ 2.3
STAG1Q8WVM7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.43■■■□□ 2.3
STAG1Q8WVM7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
STAG1Q8WVM7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
STAG1Q8WVM7 RARRES2P2-201ENST00000394842 485 ntBASIC29.42■■■□□ 2.3
STAG1Q8WVM7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
STAG1Q8WVM7 RNF126P1-201ENST00000567452 1320 ntBASIC29.42■■■□□ 2.3
STAG1Q8WVM7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
STAG1Q8WVM7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
STAG1Q8WVM7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
STAG1Q8WVM7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
STAG1Q8WVM7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
STAG1Q8WVM7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms