Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF139Q8WU17 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF139Q8WU17 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF139Q8WU17 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF139Q8WU17 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF139Q8WU17 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF139Q8WU17 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RNF139Q8WU17 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF139Q8WU17 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.23■■□□□ 1.79
RNF139Q8WU17 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
RNF139Q8WU17 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
RNF139Q8WU17 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
RNF139Q8WU17 AC018358.1-201ENST00000631079 1402 ntBASIC26.22■■□□□ 1.79
RNF139Q8WU17 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RNF139Q8WU17 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RNF139Q8WU17 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RNF139Q8WU17 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RNF139Q8WU17 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF139Q8WU17 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RNF139Q8WU17 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
RNF139Q8WU17 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.21■■□□□ 1.79
RNF139Q8WU17 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.2■■□□□ 1.78
RNF139Q8WU17 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNF139Q8WU17 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RNF139Q8WU17 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RNF139Q8WU17 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
RNF139Q8WU17 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNF139Q8WU17 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.18■■□□□ 1.78
RNF139Q8WU17 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.18■■□□□ 1.78
RNF139Q8WU17 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RNF139Q8WU17 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RNF139Q8WU17 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.17■■□□□ 1.78
RNF139Q8WU17 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
RNF139Q8WU17 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RNF139Q8WU17 LINC01003-201ENST00000564834 1764 ntBASIC26.16■■□□□ 1.78
RNF139Q8WU17 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF139Q8WU17 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.16■■□□□ 1.78
RNF139Q8WU17 BX255925.1-201ENST00000566954 1854 ntBASIC26.16■■□□□ 1.78
RNF139Q8WU17 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RNF139Q8WU17 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF139Q8WU17 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF139Q8WU17 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
RNF139Q8WU17 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
RNF139Q8WU17 AC022413.1-201ENST00000624602 984 ntBASIC26.15■■□□□ 1.78
RNF139Q8WU17 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RNF139Q8WU17 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF139Q8WU17 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.14■■□□□ 1.78
RNF139Q8WU17 AC126177.7-201ENST00000547904 679 ntBASIC26.14■■□□□ 1.78
RNF139Q8WU17 HSD17B1P1-201ENST00000590052 955 ntBASIC26.14■■□□□ 1.78
RNF139Q8WU17 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF139Q8WU17 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.14■■□□□ 1.78
RNF139Q8WU17 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RNF139Q8WU17 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
RNF139Q8WU17 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RNF139Q8WU17 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
RNF139Q8WU17 GPX1-201ENST00000419349 1106 ntBASIC26.13■■□□□ 1.77
RNF139Q8WU17 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RNF139Q8WU17 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.12■■□□□ 1.77
RNF139Q8WU17 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF139Q8WU17 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF139Q8WU17 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RNF139Q8WU17 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF139Q8WU17 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
RNF139Q8WU17 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
RNF139Q8WU17 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.11■■□□□ 1.77
RNF139Q8WU17 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RNF139Q8WU17 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RNF139Q8WU17 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF139Q8WU17 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF139Q8WU17 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.1■■□□□ 1.77
RNF139Q8WU17 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.1■■□□□ 1.77
RNF139Q8WU17 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.1■■□□□ 1.77
RNF139Q8WU17 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
RNF139Q8WU17 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF139Q8WU17 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.09■■□□□ 1.77
RNF139Q8WU17 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.08■■□□□ 1.77
RNF139Q8WU17 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF139Q8WU17 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RNF139Q8WU17 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
RNF139Q8WU17 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
RNF139Q8WU17 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.07■■□□□ 1.76
RNF139Q8WU17 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF139Q8WU17 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF139Q8WU17 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF139Q8WU17 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF139Q8WU17 AC060814.1-201ENST00000554326 538 ntBASIC26.06■■□□□ 1.76
RNF139Q8WU17 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.06■■□□□ 1.76
RNF139Q8WU17 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RNF139Q8WU17 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.06■■□□□ 1.76
RNF139Q8WU17 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF139Q8WU17 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RNF139Q8WU17 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.05■■□□□ 1.76
RNF139Q8WU17 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF139Q8WU17 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF139Q8WU17 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.05■■□□□ 1.76
RNF139Q8WU17 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RNF139Q8WU17 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF139Q8WU17 AL359258.2-201ENST00000564063 1566 ntBASIC26.04■■□□□ 1.76
RNF139Q8WU17 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RNF139Q8WU17 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms