Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 BX255925.1-201ENST00000566954 1854 ntBASIC24.85■■□□□ 1.57
TRAM1L1Q8N609 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRAM1L1Q8N609 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRAM1L1Q8N609 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRAM1L1Q8N609 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRAM1L1Q8N609 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
TRAM1L1Q8N609 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
TRAM1L1Q8N609 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.84■■□□□ 1.57
TRAM1L1Q8N609 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TRAM1L1Q8N609 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.83■■□□□ 1.56
TRAM1L1Q8N609 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.83■■□□□ 1.56
TRAM1L1Q8N609 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
TRAM1L1Q8N609 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.83■■□□□ 1.56
TRAM1L1Q8N609 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
TRAM1L1Q8N609 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRAM1L1Q8N609 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRAM1L1Q8N609 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.82■■□□□ 1.56
TRAM1L1Q8N609 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRAM1L1Q8N609 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRAM1L1Q8N609 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
TRAM1L1Q8N609 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRAM1L1Q8N609 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRAM1L1Q8N609 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRAM1L1Q8N609 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TRAM1L1Q8N609 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.8■■□□□ 1.56
TRAM1L1Q8N609 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRAM1L1Q8N609 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.79■■□□□ 1.56
TRAM1L1Q8N609 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRAM1L1Q8N609 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TRAM1L1Q8N609 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
TRAM1L1Q8N609 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRAM1L1Q8N609 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRAM1L1Q8N609 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRAM1L1Q8N609 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRAM1L1Q8N609 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.78■■□□□ 1.56
TRAM1L1Q8N609 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
TRAM1L1Q8N609 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRAM1L1Q8N609 AC126177.7-201ENST00000547904 679 ntBASIC24.77■■□□□ 1.56
TRAM1L1Q8N609 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.77■■□□□ 1.56
TRAM1L1Q8N609 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TRAM1L1Q8N609 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.77■■□□□ 1.56
TRAM1L1Q8N609 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRAM1L1Q8N609 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TRAM1L1Q8N609 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRAM1L1Q8N609 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.76■■□□□ 1.55
TRAM1L1Q8N609 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
TRAM1L1Q8N609 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.75■■□□□ 1.55
TRAM1L1Q8N609 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRAM1L1Q8N609 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
TRAM1L1Q8N609 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
TRAM1L1Q8N609 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.72■■□□□ 1.55
TRAM1L1Q8N609 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.72■■□□□ 1.55
TRAM1L1Q8N609 AC060814.1-201ENST00000554326 538 ntBASIC24.72■■□□□ 1.55
TRAM1L1Q8N609 AC022413.1-201ENST00000624602 984 ntBASIC24.72■■□□□ 1.55
TRAM1L1Q8N609 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.72■■□□□ 1.55
TRAM1L1Q8N609 AL359258.2-201ENST00000564063 1566 ntBASIC24.71■■□□□ 1.55
TRAM1L1Q8N609 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.71■■□□□ 1.55
TRAM1L1Q8N609 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.71■■□□□ 1.55
TRAM1L1Q8N609 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRAM1L1Q8N609 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.71■■□□□ 1.55
TRAM1L1Q8N609 WHAMMP3-201ENST00000611636 1609 ntBASIC24.71■■□□□ 1.55
TRAM1L1Q8N609 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
TRAM1L1Q8N609 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRAM1L1Q8N609 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TRAM1L1Q8N609 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRAM1L1Q8N609 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.7■■□□□ 1.54
TRAM1L1Q8N609 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRAM1L1Q8N609 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
TRAM1L1Q8N609 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TRAM1L1Q8N609 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRAM1L1Q8N609 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRAM1L1Q8N609 GPX1-201ENST00000419349 1106 ntBASIC24.69■■□□□ 1.54
TRAM1L1Q8N609 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TRAM1L1Q8N609 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
TRAM1L1Q8N609 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TRAM1L1Q8N609 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TRAM1L1Q8N609 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.68■■□□□ 1.54
TRAM1L1Q8N609 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.68■■□□□ 1.54
TRAM1L1Q8N609 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
TRAM1L1Q8N609 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRAM1L1Q8N609 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRAM1L1Q8N609 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
TRAM1L1Q8N609 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TRAM1L1Q8N609 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.66■■□□□ 1.54
TRAM1L1Q8N609 HSD17B1P1-201ENST00000590052 955 ntBASIC24.66■■□□□ 1.54
TRAM1L1Q8N609 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TRAM1L1Q8N609 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRAM1L1Q8N609 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.64■■□□□ 1.54
TRAM1L1Q8N609 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TRAM1L1Q8N609 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.53
TRAM1L1Q8N609 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRAM1L1Q8N609 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
TRAM1L1Q8N609 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRAM1L1Q8N609 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.63■■□□□ 1.53
TRAM1L1Q8N609 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
TRAM1L1Q8N609 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRAM1L1Q8N609 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRAM1L1Q8N609 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.62■■□□□ 1.53
TRAM1L1Q8N609 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRAM1L1Q8N609 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms