Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CLCNKAP51800 AC060814.1-201ENST00000554326 538 ntBASIC24.57■■□□□ 1.52
CLCNKAP51800 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.57■■□□□ 1.52
CLCNKAP51800 RNF126P1-201ENST00000567452 1320 ntBASIC24.57■■□□□ 1.52
CLCNKAP51800 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLCNKAP51800 AC126177.7-201ENST00000547904 679 ntBASIC24.56■■□□□ 1.52
CLCNKAP51800 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.56■■□□□ 1.52
CLCNKAP51800 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.55■■□□□ 1.52
CLCNKAP51800 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CLCNKAP51800 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.54■■□□□ 1.52
CLCNKAP51800 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.54■■□□□ 1.52
CLCNKAP51800 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLCNKAP51800 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLCNKAP51800 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CLCNKAP51800 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLCNKAP51800 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLCNKAP51800 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLCNKAP51800 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.53■■□□□ 1.52
CLCNKAP51800 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CLCNKAP51800 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.53■■□□□ 1.52
CLCNKAP51800 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
CLCNKAP51800 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CLCNKAP51800 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLCNKAP51800 RARRES2P2-201ENST00000394842 485 ntBASIC24.51■■□□□ 1.51
CLCNKAP51800 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLCNKAP51800 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLCNKAP51800 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
CLCNKAP51800 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLCNKAP51800 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CLCNKAP51800 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CLCNKAP51800 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CLCNKAP51800 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLCNKAP51800 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.49■■□□□ 1.51
CLCNKAP51800 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.49■■□□□ 1.51
CLCNKAP51800 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLCNKAP51800 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CLCNKAP51800 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CLCNKAP51800 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.49■■□□□ 1.51
CLCNKAP51800 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CLCNKAP51800 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CLCNKAP51800 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CLCNKAP51800 AC092296.2-201ENST00000589470 999 ntBASIC24.48■■□□□ 1.51
CLCNKAP51800 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
CLCNKAP51800 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLCNKAP51800 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLCNKAP51800 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CLCNKAP51800 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CLCNKAP51800 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CLCNKAP51800 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.47■■□□□ 1.51
CLCNKAP51800 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CLCNKAP51800 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLCNKAP51800 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CLCNKAP51800 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
CLCNKAP51800 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.45■■□□□ 1.5
CLCNKAP51800 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CLCNKAP51800 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.44■■□□□ 1.5
CLCNKAP51800 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CLCNKAP51800 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CLCNKAP51800 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CLCNKAP51800 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CLCNKAP51800 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CLCNKAP51800 ECEL1P2-201ENST00000461596 1295 ntBASIC24.43■■□□□ 1.5
CLCNKAP51800 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLCNKAP51800 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLCNKAP51800 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CLCNKAP51800 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CLCNKAP51800 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CLCNKAP51800 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CLCNKAP51800 AC142086.6-201ENST00000621154 1765 ntBASIC24.42■■□□□ 1.5
CLCNKAP51800 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.42■■□□□ 1.5
CLCNKAP51800 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CLCNKAP51800 AL359258.2-201ENST00000564063 1566 ntBASIC24.41■■□□□ 1.5
CLCNKAP51800 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CLCNKAP51800 LINC01003-201ENST00000564834 1764 ntBASIC24.4■■□□□ 1.5
CLCNKAP51800 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.4■■□□□ 1.5
CLCNKAP51800 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CLCNKAP51800 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CLCNKAP51800 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.39■■□□□ 1.5
CLCNKAP51800 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
CLCNKAP51800 AL157400.5-201ENST00000507624 621 ntBASIC24.39■■□□□ 1.49
CLCNKAP51800 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CLCNKAP51800 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.37■■□□□ 1.49
CLCNKAP51800 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CLCNKAP51800 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CLCNKAP51800 ABHD17AP5-201ENST00000580133 923 ntBASIC24.36■■□□□ 1.49
CLCNKAP51800 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.36■■□□□ 1.49
CLCNKAP51800 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.36■■□□□ 1.49
CLCNKAP51800 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CLCNKAP51800 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CLCNKAP51800 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.35■■□□□ 1.49
CLCNKAP51800 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.35■■□□□ 1.49
CLCNKAP51800 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLCNKAP51800 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLCNKAP51800 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.34■■□□□ 1.49
CLCNKAP51800 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CLCNKAP51800 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CLCNKAP51800 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.33■■□□□ 1.49
CLCNKAP51800 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.33■■□□□ 1.49
CLCNKAP51800 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CLCNKAP51800 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms