Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 FCY21YER060W 1587 nt7.11□□□□□ -1.27
TY1A-ER1P0CX71 GUS1YGL245W 2127 nt7.1□□□□□ -1.27
TY1A-ER1P0CX71 YIL086CYIL086C 309 nt7.1□□□□□ -1.27
TY1A-ER1P0CX71 RCE1YMR274C 948 nt7.1□□□□□ -1.27
TY1A-ER1P0CX71 YMC2YBR104W 990 nt7.1□□□□□ -1.27
TY1A-ER1P0CX71 RTG2YGL252C 1767 nt7.1□□□□□ -1.27
TY1A-ER1P0CX71 RBG2YGR173W 1107 nt7.09□□□□□ -1.27
TY1A-ER1P0CX71 ESS1YJR017C 513 nt7.09□□□□□ -1.27
TY1A-ER1P0CX71 YLL017WYLL017W 312 nt7.09□□□□□ -1.27
TY1A-ER1P0CX71 SPE4YLR146C 903 nt7.09□□□□□ -1.27
TY1A-ER1P0CX71 ATO2YNR002C 849 nt7.09□□□□□ -1.27
TY1A-ER1P0CX71 IRC11YOR013W 471 nt7.09□□□□□ -1.27
TY1A-ER1P0CX71 CRC1YOR100C 984 nt7.09□□□□□ -1.27
TY1A-ER1P0CX71 HAT1YPL001W 1125 nt7.09□□□□□ -1.27
TY1A-ER1P0CX71 YPL264CYPL264C 1062 nt7.09□□□□□ -1.27
TY1A-ER1P0CX71 GCD11YER025W 1584 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 MSS116YDR194C 1995 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 SRG1SRG1 551 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 APT2YDR441C 546 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 DDI1YER143W 1287 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 AAD6YFL056C 639 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 YGL101WYGL101W 648 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 HST2YPL015C 1074 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 DAP1YPL170W 459 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 HAL1YPR005C 885 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 YIL108WYIL108W 2091 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 ATG32YIL146C 1590 nt7.08□□□□□ -1.28
TY1A-ER1P0CX71 TAH18YPR048W 1872 nt7.07□□□□□ -1.28
TY1A-ER1P0CX71 YDR222WYDR222W 1248 nt7.07□□□□□ -1.28
TY1A-ER1P0CX71 RRT7YLL030C 342 nt7.07□□□□□ -1.28
TY1A-ER1P0CX71 ATP10YLR393W 840 nt7.07□□□□□ -1.28
TY1A-ER1P0CX71 ERG6YML008C 1152 nt7.07□□□□□ -1.28
TY1A-ER1P0CX71 YMR253CYMR253C 1245 nt7.07□□□□□ -1.28
TY1A-ER1P0CX71 SSU72YNL222W 621 nt7.07□□□□□ -1.28
TY1A-ER1P0CX71 NTG2YOL043C 1143 nt7.07□□□□□ -1.28
TY1A-ER1P0CX71 VPS68YOL129W 555 nt7.07□□□□□ -1.28
TY1A-ER1P0CX71 YOR169CYOR169C 465 nt7.07□□□□□ -1.28
TY1A-ER1P0CX71 HXT9YJL219W 1704 nt7.07□□□□□ -1.28
TY1A-ER1P0CX71 DHH1YDL160C 1521 nt7.06□□□□□ -1.28
TY1A-ER1P0CX71 MIF2YKL089W 1650 nt7.06□□□□□ -1.28
TY1A-ER1P0CX71 ERR3YMR323W 1314 nt7.06□□□□□ -1.28
TY1A-ER1P0CX71 ERR1YOR393W 1314 nt7.06□□□□□ -1.28
TY1A-ER1P0CX71 ERR2YPL281C 1314 nt7.06□□□□□ -1.28
TY1A-ER1P0CX71 YIL177CYIL177C 5277 nt7.06□□□□□ -1.28
TY1A-ER1P0CX71 RRT5YFR032C 870 nt7.06□□□□□ -1.28
TY1A-ER1P0CX71 CSG2YBR036C 1233 nt7.06□□□□□ -1.28
TY1A-ER1P0CX71 PRP46YPL151C 1356 nt7.06□□□□□ -1.28
TY1A-ER1P0CX71 BPL1YDL141W 2073 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 GFA1YKL104C 2154 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 RPN14YGL004C 1254 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 DUO1YGL061C 744 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 OYE2YHR179W 1203 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 ADO1YJR105W 1023 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 HCR1YLR192C 798 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 YLR279WYLR279W 390 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 IRC14YOR135C 342 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 CCR4YAL021C 2514 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 CTI6YPL181W 1521 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 CIT2YCR005C 1383 nt7.05□□□□□ -1.28
TY1A-ER1P0CX71 YER152CYER152C 1332 nt7.04□□□□□ -1.28
TY1A-ER1P0CX71 YLR173WYLR173W 1827 nt7.04□□□□□ -1.28
TY1A-ER1P0CX71 MRPL32YCR003W 552 nt7.04□□□□□ -1.28
TY1A-ER1P0CX71 NUC1YJL208C 990 nt7.04□□□□□ -1.28
TY1A-ER1P0CX71 YSR3YKR053C 1215 nt7.04□□□□□ -1.28
TY1A-ER1P0CX71 YMR316C-BYMR316C-B 309 nt7.04□□□□□ -1.28
TY1A-ER1P0CX71 YNR064CYNR064C 873 nt7.04□□□□□ -1.28
TY1A-ER1P0CX71 KEL3YPL263C 1956 nt7.04□□□□□ -1.28
TY1A-ER1P0CX71 YEF1YEL041W 1488 nt7.04□□□□□ -1.28
TY1A-ER1P0CX71 MSB4YOL112W 1479 nt7.04□□□□□ -1.28
TY1A-ER1P0CX71 RCK1YGL158W 1539 nt7.03□□□□□ -1.28
TY1A-ER1P0CX71 POX1YGL205W 2247 nt7.03□□□□□ -1.28
TY1A-ER1P0CX71 snR86snR86 1004 nt7.03□□□□□ -1.28
TY1A-ER1P0CX71 ARI1YGL157W 1044 nt7.03□□□□□ -1.28
TY1A-ER1P0CX71 YNL226WYNL226W 411 nt7.03□□□□□ -1.28
TY1A-ER1P0CX71 KGD2YDR148C 1392 nt7.03□□□□□ -1.28
TY1A-ER1P0CX71 TPS1YBR126C 1488 nt7.03□□□□□ -1.28
TY1A-ER1P0CX71 SHR3YDL212W 633 nt7.02□□□□□ -1.29
TY1A-ER1P0CX71 MRP1YDR347W 966 nt7.02□□□□□ -1.29
TY1A-ER1P0CX71 DCG1YIR030C 735 nt7.02□□□□□ -1.29
TY1A-ER1P0CX71 ERP2YAL007C 648 nt7.02□□□□□ -1.29
TY1A-ER1P0CX71 XYL2YLR070C 1071 nt7.02□□□□□ -1.29
TY1A-ER1P0CX71 ERV25YML012W 636 nt7.02□□□□□ -1.29
TY1A-ER1P0CX71 RRT8YOL048C 1029 nt7.02□□□□□ -1.29
TY1A-ER1P0CX71 PTC4YBR125C 1182 nt7.02□□□□□ -1.29
TY1A-ER1P0CX71 ATG18YFR021W 1503 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 WSC4YHL028W 1818 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 TFC6YDR362C 2019 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 Q0142Q0142 177 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 WSS1YHR134W 810 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 YLR402WYLR402W 192 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 BLS1YLR408C 369 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 GTR1YML121W 933 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 TMA23YMR269W 636 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 JNM1YMR294W 1122 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 SFT2YBL102W 648 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 MET13YGL125W 1803 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 MAS2YHR024C 1449 nt7.01□□□□□ -1.29
TY1A-ER1P0CX71 MDM10YAL010C 1482 nt7□□□□□ -1.29
TY1A-ER1P0CX71 LPL1YOR059C 1353 nt7□□□□□ -1.29
TY1A-ER1P0CX71 PTR2YKR093W 1806 nt7□□□□□ -1.29
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms