Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TDP2O95551 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TDP2O95551 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.42■■■□□ 2.14
TDP2O95551 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.42■■■□□ 2.14
TDP2O95551 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
TDP2O95551 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
TDP2O95551 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
TDP2O95551 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TDP2O95551 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.41■■■□□ 2.14
TDP2O95551 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
TDP2O95551 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TDP2O95551 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TDP2O95551 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TDP2O95551 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.4■■■□□ 2.14
TDP2O95551 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TDP2O95551 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
TDP2O95551 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.4■■■□□ 2.14
TDP2O95551 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
TDP2O95551 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.39■■■□□ 2.14
TDP2O95551 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
TDP2O95551 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TDP2O95551 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
TDP2O95551 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TDP2O95551 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TDP2O95551 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.38■■■□□ 2.13
TDP2O95551 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.38■■■□□ 2.13
TDP2O95551 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
TDP2O95551 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.38■■■□□ 2.13
TDP2O95551 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TDP2O95551 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TDP2O95551 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TDP2O95551 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.37■■■□□ 2.13
TDP2O95551 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TDP2O95551 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.36■■■□□ 2.13
TDP2O95551 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
TDP2O95551 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TDP2O95551 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
TDP2O95551 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
TDP2O95551 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TDP2O95551 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
TDP2O95551 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TDP2O95551 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.35■■■□□ 2.13
TDP2O95551 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.34■■■□□ 2.13
TDP2O95551 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.34■■■□□ 2.13
TDP2O95551 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TDP2O95551 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
TDP2O95551 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
TDP2O95551 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TDP2O95551 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.33■■■□□ 2.13
TDP2O95551 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TDP2O95551 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.32■■■□□ 2.12
TDP2O95551 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TDP2O95551 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
TDP2O95551 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TDP2O95551 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TDP2O95551 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.31■■■□□ 2.12
TDP2O95551 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
TDP2O95551 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TDP2O95551 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TDP2O95551 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
TDP2O95551 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
TDP2O95551 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TDP2O95551 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
TDP2O95551 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
TDP2O95551 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TDP2O95551 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
TDP2O95551 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.29■■■□□ 2.12
TDP2O95551 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TDP2O95551 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.27■■■□□ 2.12
TDP2O95551 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TDP2O95551 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
TDP2O95551 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TDP2O95551 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TDP2O95551 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TDP2O95551 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.25■■■□□ 2.11
TDP2O95551 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TDP2O95551 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
TDP2O95551 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TDP2O95551 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.25■■■□□ 2.11
TDP2O95551 AL359258.2-201ENST00000564063 1566 ntBASIC28.24■■■□□ 2.11
TDP2O95551 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.24■■■□□ 2.11
TDP2O95551 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
TDP2O95551 AC060814.1-201ENST00000554326 538 ntBASIC28.24■■■□□ 2.11
TDP2O95551 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.24■■■□□ 2.11
TDP2O95551 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
TDP2O95551 WHAMMP3-201ENST00000611636 1609 ntBASIC28.24■■■□□ 2.11
TDP2O95551 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TDP2O95551 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
TDP2O95551 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.22■■■□□ 2.11
TDP2O95551 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TDP2O95551 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TDP2O95551 AL449106.1-201ENST00000608517 1980 ntBASIC28.21■■■□□ 2.11
TDP2O95551 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TDP2O95551 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
TDP2O95551 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.21■■■□□ 2.11
TDP2O95551 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
TDP2O95551 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
TDP2O95551 AC022413.1-201ENST00000624602 984 ntBASIC28.2■■■□□ 2.1
TDP2O95551 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TDP2O95551 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms