Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01548A6NM66 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01548A6NM66 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01548A6NM66 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01548A6NM66 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01548A6NM66 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01548A6NM66 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.78■□□□□ 0.76
LINC01548A6NM66 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LINC01548A6NM66 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01548A6NM66 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LINC01548A6NM66 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.77■□□□□ 0.76
LINC01548A6NM66 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01548A6NM66 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01548A6NM66 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LINC01548A6NM66 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LINC01548A6NM66 LINC01003-201ENST00000564834 1764 ntBASIC19.77■□□□□ 0.76
LINC01548A6NM66 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LINC01548A6NM66 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.76■□□□□ 0.75
LINC01548A6NM66 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01548A6NM66 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LINC01548A6NM66 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.76■□□□□ 0.75
LINC01548A6NM66 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01548A6NM66 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.76■□□□□ 0.75
LINC01548A6NM66 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01548A6NM66 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LINC01548A6NM66 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LINC01548A6NM66 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01548A6NM66 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01548A6NM66 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01548A6NM66 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LINC01548A6NM66 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LINC01548A6NM66 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC01548A6NM66 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.73■□□□□ 0.75
LINC01548A6NM66 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.73■□□□□ 0.75
LINC01548A6NM66 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.73■□□□□ 0.75
LINC01548A6NM66 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LINC01548A6NM66 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LINC01548A6NM66 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01548A6NM66 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.72■□□□□ 0.75
LINC01548A6NM66 AC022413.1-201ENST00000624602 984 ntBASIC19.72■□□□□ 0.75
LINC01548A6NM66 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01548A6NM66 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01548A6NM66 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01548A6NM66 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LINC01548A6NM66 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.72■□□□□ 0.75
LINC01548A6NM66 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01548A6NM66 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LINC01548A6NM66 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01548A6NM66 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.71■□□□□ 0.75
LINC01548A6NM66 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01548A6NM66 BX255925.1-201ENST00000566954 1854 ntBASIC19.71■□□□□ 0.75
LINC01548A6NM66 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01548A6NM66 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LINC01548A6NM66 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC01548A6NM66 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LINC01548A6NM66 GPX1-201ENST00000419349 1106 ntBASIC19.7■□□□□ 0.74
LINC01548A6NM66 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.7■□□□□ 0.74
LINC01548A6NM66 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LINC01548A6NM66 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LINC01548A6NM66 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LINC01548A6NM66 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.69■□□□□ 0.74
LINC01548A6NM66 HSD17B1P1-201ENST00000590052 955 ntBASIC19.69■□□□□ 0.74
LINC01548A6NM66 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LINC01548A6NM66 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.69■□□□□ 0.74
LINC01548A6NM66 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01548A6NM66 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01548A6NM66 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01548A6NM66 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LINC01548A6NM66 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LINC01548A6NM66 AL359258.2-201ENST00000564063 1566 ntBASIC19.67■□□□□ 0.74
LINC01548A6NM66 AC060814.1-201ENST00000554326 538 ntBASIC19.67■□□□□ 0.74
LINC01548A6NM66 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.67■□□□□ 0.74
LINC01548A6NM66 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LINC01548A6NM66 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01548A6NM66 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01548A6NM66 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01548A6NM66 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LINC01548A6NM66 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LINC01548A6NM66 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01548A6NM66 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01548A6NM66 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.64■□□□□ 0.73
LINC01548A6NM66 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINC01548A6NM66 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.64■□□□□ 0.73
LINC01548A6NM66 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01548A6NM66 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01548A6NM66 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.63■□□□□ 0.73
LINC01548A6NM66 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01548A6NM66 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.63■□□□□ 0.73
LINC01548A6NM66 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.63■□□□□ 0.73
LINC01548A6NM66 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01548A6NM66 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.62■□□□□ 0.73
LINC01548A6NM66 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01548A6NM66 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.62■□□□□ 0.73
LINC01548A6NM66 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LINC01548A6NM66 WHAMMP3-201ENST00000611636 1609 ntBASIC19.62■□□□□ 0.73
LINC01548A6NM66 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LINC01548A6NM66 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01548A6NM66 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.61■□□□□ 0.73
LINC01548A6NM66 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01548A6NM66 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms