Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 MIR4674-201ENST00000582457 87 ntBASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 MIR3180-5-201ENST00000583743 153 ntBASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 REXO1L10P-201ENST00000615707 1290 ntBASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 REXO1L12P-201ENST00000622156 912 ntBASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHA3Q9Y5H8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 PHGDH-209ENST00000641074 1780 ntBASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 UBE2SP1-201ENST00000450587 669 ntBASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 AC113410.3-201ENST00000623366 203 ntBASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA3Q9Y5H8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHA3Q9Y5H8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHA3Q9Y5H8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHA3Q9Y5H8 AC036111.1-201ENST00000533973 1582 ntBASIC19.27■□□□□ 0.67
PCDHA3Q9Y5H8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHA3Q9Y5H8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 GNAS-203ENST00000306120 1878 ntBASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 AL163051.1-201ENST00000569214 1512 ntBASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 SDHAP2-201ENST00000455183 2001 ntBASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 CRYGFP-201ENST00000418459 633 ntBASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 AC012618.2-201ENST00000428058 849 ntBASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 AC098590.1-201ENST00000468126 897 ntBASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 AC233702.5-201ENST00000584107 538 ntBASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 AP001412.1-201ENST00000608405 714 ntBASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHA3Q9Y5H8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 AL049637.2-201ENST00000641778 930 ntBASIC19.25■□□□□ 0.67
PCDHA3Q9Y5H8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms