Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 AL049812.1-201ENST00000432563 2267 ntBASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 AL023284.2-201ENST00000405850 579 ntBASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA3Q9Y5H0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 NOC2LP1-202ENST00000452600 2235 ntBASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 AC026396.1-201ENST00000419388 421 ntBASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 MIR3180-5-201ENST00000583743 153 ntBASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGA3Q9Y5H0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGA3Q9Y5H0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
PCDHGA3Q9Y5H0 KRT8P3-201ENST00000519669 1449 ntBASIC17.89■□□□□ 0.46
PCDHGA3Q9Y5H0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
PCDHGA3Q9Y5H0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGA3Q9Y5H0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGA3Q9Y5H0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGA3Q9Y5H0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGA3Q9Y5H0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGA3Q9Y5H0 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA3Q9Y5H0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms