Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.12■□□□□ 0.97
R3HCC1Q9Y3T6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 RARRES2P10-201ENST00000564312 460 ntBASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
R3HCC1Q9Y3T6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 HTR7P1-201ENST00000538670 1336 ntBASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 AP002982.1-201ENST00000492365 877 ntBASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 KRT18P16-201ENST00000510337 1294 ntBASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 AC018695.7-201ENST00000624587 2492 ntBASIC21.1■□□□□ 0.97
R3HCC1Q9Y3T6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 AC008550.1-201ENST00000511500 884 ntBASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
R3HCC1Q9Y3T6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms