Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 AC003957.1-201ENST00000625108 2673 ntBASIC20.52■□□□□ 0.88
GNEQ9Y223 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GNEQ9Y223 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
GNEQ9Y223 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GNEQ9Y223 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.51■□□□□ 0.87
GNEQ9Y223 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.51■□□□□ 0.87
GNEQ9Y223 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GNEQ9Y223 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
GNEQ9Y223 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GNEQ9Y223 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.51■□□□□ 0.87
GNEQ9Y223 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GNEQ9Y223 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GNEQ9Y223 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.51■□□□□ 0.87
GNEQ9Y223 FAM197Y8-203ENST00000450145 560 ntBASIC20.51■□□□□ 0.87
GNEQ9Y223 AP001005.1-201ENST00000571755 1248 ntBASIC20.51■□□□□ 0.87
GNEQ9Y223 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GNEQ9Y223 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
GNEQ9Y223 AC083906.6-201ENST00000641366 219 ntBASIC20.51■□□□□ 0.87
GNEQ9Y223 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GNEQ9Y223 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GNEQ9Y223 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GNEQ9Y223 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GNEQ9Y223 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
GNEQ9Y223 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GNEQ9Y223 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.5■□□□□ 0.87
GNEQ9Y223 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GNEQ9Y223 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.5■□□□□ 0.87
GNEQ9Y223 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
GNEQ9Y223 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GNEQ9Y223 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GNEQ9Y223 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.5■□□□□ 0.87
GNEQ9Y223 AC096582.2-201ENST00000510860 516 ntBASIC20.5■□□□□ 0.87
GNEQ9Y223 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GNEQ9Y223 AC005336.2-201ENST00000593183 939 ntBASIC20.5■□□□□ 0.87
GNEQ9Y223 AL773604.1-201ENST00000617417 272 ntBASIC20.5■□□□□ 0.87
GNEQ9Y223 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GNEQ9Y223 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GNEQ9Y223 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
GNEQ9Y223 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
GNEQ9Y223 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.5■□□□□ 0.87
GNEQ9Y223 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GNEQ9Y223 AC009102.3-201ENST00000623118 1491 ntBASIC20.5■□□□□ 0.87
GNEQ9Y223 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.49■□□□□ 0.87
GNEQ9Y223 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
GNEQ9Y223 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.49■□□□□ 0.87
GNEQ9Y223 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
GNEQ9Y223 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.49■□□□□ 0.87
GNEQ9Y223 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.49■□□□□ 0.87
GNEQ9Y223 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.49■□□□□ 0.87
GNEQ9Y223 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.49■□□□□ 0.87
GNEQ9Y223 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
GNEQ9Y223 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 AL161938.1-201ENST00000569833 2180 ntBASIC20.49■□□□□ 0.87
GNEQ9Y223 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GNEQ9Y223 IL9RP2-201ENST00000423948 1312 ntBASIC20.49■□□□□ 0.87
GNEQ9Y223 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
GNEQ9Y223 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.48■□□□□ 0.87
GNEQ9Y223 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
GNEQ9Y223 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 KRT18P67-201ENST00000432816 1264 ntBASIC20.48■□□□□ 0.87
GNEQ9Y223 AC132008.2-207ENST00000454517 770 ntBASIC20.48■□□□□ 0.87
GNEQ9Y223 AC068472.1-201ENST00000474589 881 ntBASIC20.48■□□□□ 0.87
GNEQ9Y223 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.48■□□□□ 0.87
GNEQ9Y223 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.48■□□□□ 0.87
GNEQ9Y223 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.48■□□□□ 0.87
GNEQ9Y223 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.48■□□□□ 0.87
GNEQ9Y223 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
GNEQ9Y223 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.48■□□□□ 0.87
GNEQ9Y223 AC148477.8-201ENST00000624298 468 ntBASIC20.48■□□□□ 0.87
GNEQ9Y223 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.48■□□□□ 0.87
GNEQ9Y223 AF228730.7-201ENST00000641842 219 ntBASIC20.48■□□□□ 0.87
GNEQ9Y223 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GNEQ9Y223 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.48■□□□□ 0.87
GNEQ9Y223 AFG3L1P-217ENST00000557444 2447 ntBASIC20.48■□□□□ 0.87
GNEQ9Y223 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
GNEQ9Y223 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms