Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
HACD3Q9P035 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
HACD3Q9P035 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
HACD3Q9P035 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
HACD3Q9P035 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.66■□□□□ 0.58
HACD3Q9P035 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HACD3Q9P035 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HACD3Q9P035 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.65■□□□□ 0.58
HACD3Q9P035 AL390961.4-201ENST00000623958 2535 ntBASIC18.65■□□□□ 0.58
HACD3Q9P035 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.65■□□□□ 0.58
HACD3Q9P035 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 AP000523.1-201ENST00000398242 1049 ntBASIC18.65■□□□□ 0.58
HACD3Q9P035 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.65■□□□□ 0.58
HACD3Q9P035 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.65■□□□□ 0.58
HACD3Q9P035 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.65■□□□□ 0.58
HACD3Q9P035 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.65■□□□□ 0.58
HACD3Q9P035 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.65■□□□□ 0.58
HACD3Q9P035 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.65■□□□□ 0.58
HACD3Q9P035 NEK4P2-201ENST00000580004 1012 ntBASIC18.65■□□□□ 0.58
HACD3Q9P035 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
HACD3Q9P035 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.65■□□□□ 0.58
HACD3Q9P035 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HACD3Q9P035 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HACD3Q9P035 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
HACD3Q9P035 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HACD3Q9P035 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HACD3Q9P035 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HACD3Q9P035 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
HACD3Q9P035 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HACD3Q9P035 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HACD3Q9P035 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HACD3Q9P035 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
HACD3Q9P035 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.64■□□□□ 0.57
HACD3Q9P035 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.64■□□□□ 0.57
HACD3Q9P035 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HACD3Q9P035 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.64■□□□□ 0.57
HACD3Q9P035 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HACD3Q9P035 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HACD3Q9P035 ECEL1P3-201ENST00000427961 737 ntBASIC18.64■□□□□ 0.57
HACD3Q9P035 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.64■□□□□ 0.57
HACD3Q9P035 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 LINC01023-201ENST00000606054 436 ntBASIC18.64■□□□□ 0.57
HACD3Q9P035 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.64■□□□□ 0.57
HACD3Q9P035 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
HACD3Q9P035 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HACD3Q9P035 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.64■□□□□ 0.57
HACD3Q9P035 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HACD3Q9P035 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.64■□□□□ 0.57
HACD3Q9P035 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.64■□□□□ 0.57
HACD3Q9P035 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 AC090164.3-201ENST00000610780 2143 ntBASIC18.64■□□□□ 0.57
HACD3Q9P035 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HACD3Q9P035 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HACD3Q9P035 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
HACD3Q9P035 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HACD3Q9P035 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.63■□□□□ 0.57
HACD3Q9P035 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HACD3Q9P035 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HACD3Q9P035 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms