Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CNIH4Q9P003 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.26■□□□□ 0.35
CNIH4Q9P003 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.26■□□□□ 0.35
CNIH4Q9P003 COX11P1-201ENST00000489116 835 ntBASIC17.26■□□□□ 0.35
CNIH4Q9P003 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 AL049597.2-201ENST00000565575 961 ntBASIC17.26■□□□□ 0.35
CNIH4Q9P003 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CNIH4Q9P003 KRT8P45-201ENST00000414328 1447 ntBASIC17.26■□□□□ 0.35
CNIH4Q9P003 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CNIH4Q9P003 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.26■□□□□ 0.35
CNIH4Q9P003 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNIH4Q9P003 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 MCCD1P1-208ENST00000445732 328 ntBASIC17.25■□□□□ 0.35
CNIH4Q9P003 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 WWOX-216ENST00000569818 525 ntBASIC17.25■□□□□ 0.35
CNIH4Q9P003 NEK4P2-201ENST00000580004 1012 ntBASIC17.25■□□□□ 0.35
CNIH4Q9P003 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.25■□□□□ 0.35
CNIH4Q9P003 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNIH4Q9P003 AL133373.2-201ENST00000623187 2828 ntBASIC17.25■□□□□ 0.35
CNIH4Q9P003 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH4Q9P003 AL354751.1-201ENST00000412768 1863 ntBASIC17.24■□□□□ 0.35
CNIH4Q9P003 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH4Q9P003 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH4Q9P003 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH4Q9P003 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH4Q9P003 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH4Q9P003 GPAT2P1-201ENST00000444924 1672 ntBASIC17.24■□□□□ 0.35
CNIH4Q9P003 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH4Q9P003 AL023284.2-201ENST00000405850 579 ntBASIC17.24■□□□□ 0.35
CNIH4Q9P003 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 AC104076.2-201ENST00000448912 469 ntBASIC17.24■□□□□ 0.35
CNIH4Q9P003 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 MIR4674-201ENST00000582457 87 ntBASIC17.24■□□□□ 0.35
CNIH4Q9P003 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 AC010331.1-201ENST00000611423 582 ntBASIC17.24■□□□□ 0.35
CNIH4Q9P003 AL590326.2-201ENST00000625139 305 ntBASIC17.24■□□□□ 0.35
CNIH4Q9P003 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CNIH4Q9P003 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 AC126763.1-201ENST00000552015 2118 ntBASIC17.24■□□□□ 0.35
CNIH4Q9P003 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.24■□□□□ 0.35
CNIH4Q9P003 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms