Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 PCED1CP-201ENST00000419887 785 ntBASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 AC009065.1-201ENST00000564055 1225 ntBASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.74■□□□□ 0.43
SPHK1Q9NYA1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPHK1Q9NYA1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPHK1Q9NYA1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 MIR662-201ENST00000384847 95 ntBASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 AL645929.1-201ENST00000420084 975 ntBASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.71■□□□□ 0.43
SPHK1Q9NYA1 AC116407.4-201ENST00000623319 1061 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 310.2 ms