Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 AC073592.3-201ENST00000625118 1834 ntBASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC6A20Q9NP91 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 AC009102.3-201ENST00000623118 1491 ntBASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 SDHAP2-201ENST00000455183 2001 ntBASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 AC009065.1-201ENST00000564055 1225 ntBASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 AL358472.4-201ENST00000633140 710 ntBASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC6A20Q9NP91 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 AL671277.2-201ENST00000458060 996 ntBASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 AC083849.1-201ENST00000615227 514 ntBASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A20Q9NP91 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 PVRIG2P-201ENST00000435460 978 ntBASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 AL136038.4-201ENST00000603606 1261 ntBASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 AC091076.1-201ENST00000610741 619 ntBASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 AL391807.1-203ENST00000604392 2365 ntBASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SLC6A20Q9NP91 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A20Q9NP91 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms