Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 AP001094.4-201ENST00000579008 2176 ntBASIC17.25■□□□□ 0.35
VCX3AQ9NNX9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 AC092850.2-201ENST00000623821 2697 ntBASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 TSPY26P-202ENST00000565928 3884 ntBASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 AL023806.1-201ENST00000603994 1649 ntBASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 AC018553.1-201ENST00000616682 1458 ntBASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCX3AQ9NNX9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 SLC7A5P1-201ENST00000568957 537 ntBASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3AQ9NNX9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 FLJ16779-201ENST00000612722 7638 ntBASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3AQ9NNX9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms