Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.08■□□□□ 0.32
CHD8Q9HCK8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.08■□□□□ 0.32
CHD8Q9HCK8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHD8Q9HCK8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.08■□□□□ 0.32
CHD8Q9HCK8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHD8Q9HCK8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHD8Q9HCK8 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.08■□□□□ 0.32
CHD8Q9HCK8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHD8Q9HCK8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHD8Q9HCK8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHD8Q9HCK8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHD8Q9HCK8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 AC093520.2-201ENST00000561830 333 ntBASIC17.07■□□□□ 0.32
CHD8Q9HCK8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 AL512353.2-201ENST00000448759 1962 ntBASIC17.07■□□□□ 0.32
CHD8Q9HCK8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 UGT1A2P-201ENST00000454886 866 ntBASIC17.07■□□□□ 0.32
CHD8Q9HCK8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 AC008761.3-201ENST00000624803 892 ntBASIC17.07■□□□□ 0.32
CHD8Q9HCK8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.07■□□□□ 0.32
CHD8Q9HCK8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 ACTG1P14-201ENST00000446382 1122 ntBASIC17.06■□□□□ 0.32
CHD8Q9HCK8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 INGX-202ENST00000489074 768 ntBASIC17.06■□□□□ 0.32
CHD8Q9HCK8 AC022145.2-201ENST00000598203 171 ntBASIC17.06■□□□□ 0.32
CHD8Q9HCK8 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.06■□□□□ 0.32
CHD8Q9HCK8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 AC051619.7-201ENST00000568314 623 ntBASIC17.06■□□□□ 0.32
CHD8Q9HCK8 AC015911.4-201ENST00000588022 1070 ntBASIC17.06■□□□□ 0.32
CHD8Q9HCK8 AC006557.2-201ENST00000592985 1240 ntBASIC17.06■□□□□ 0.32
CHD8Q9HCK8 AC011467.2-201ENST00000598425 242 ntBASIC17.06■□□□□ 0.32
CHD8Q9HCK8 LINC00628-201ENST00000628516 1289 ntBASIC17.06■□□□□ 0.32
CHD8Q9HCK8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD8Q9HCK8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 AC023141.5-201ENST00000458585 616 ntBASIC17.05■□□□□ 0.32
CHD8Q9HCK8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 AC108073.2-201ENST00000464002 357 ntBASIC17.05■□□□□ 0.32
CHD8Q9HCK8 IGHV3-71-201ENST00000523324 359 ntBASIC17.05■□□□□ 0.32
CHD8Q9HCK8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 AP000867.4-201ENST00000641616 219 ntBASIC17.05■□□□□ 0.32
CHD8Q9HCK8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHD8Q9HCK8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 DUX4L27-201ENST00000554796 1261 ntBASIC17.04■□□□□ 0.32
CHD8Q9HCK8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD8Q9HCK8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms