Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP29Q9HBJ7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.01■□□□□ 0.63
USP29Q9HBJ7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP29Q9HBJ7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP29Q9HBJ7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
USP29Q9HBJ7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19■□□□□ 0.63
USP29Q9HBJ7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 KRT8P50-201ENST00000562022 1438 ntBASIC19■□□□□ 0.63
USP29Q9HBJ7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19■□□□□ 0.63
USP29Q9HBJ7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
USP29Q9HBJ7 AC034236.2-201ENST00000606662 1610 ntBASIC19■□□□□ 0.63
USP29Q9HBJ7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
USP29Q9HBJ7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
USP29Q9HBJ7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19■□□□□ 0.63
USP29Q9HBJ7 AR-207ENST00000612010 3896 ntTSL 5 BASIC19■□□□□ 0.63
USP29Q9HBJ7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19■□□□□ 0.63
USP29Q9HBJ7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19■□□□□ 0.63
USP29Q9HBJ7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19■□□□□ 0.63
USP29Q9HBJ7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
USP29Q9HBJ7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
USP29Q9HBJ7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19■□□□□ 0.63
USP29Q9HBJ7 LINC01238-205ENST00000567549 1107 ntBASIC19■□□□□ 0.63
USP29Q9HBJ7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19■□□□□ 0.63
USP29Q9HBJ7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19■□□□□ 0.63
USP29Q9HBJ7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19■□□□□ 0.63
USP29Q9HBJ7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19■□□□□ 0.63
USP29Q9HBJ7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP29Q9HBJ7 LTB4R2-202ENST00000528054 3092 ntBASIC18.99■□□□□ 0.63
USP29Q9HBJ7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 AP000593.1-201ENST00000393668 712 ntBASIC18.99■□□□□ 0.63
USP29Q9HBJ7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP29Q9HBJ7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 BX664615.1-201ENST00000443558 458 ntBASIC18.98■□□□□ 0.63
USP29Q9HBJ7 AC104076.2-201ENST00000448912 469 ntBASIC18.98■□□□□ 0.63
USP29Q9HBJ7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 AC010203.1-204ENST00000548782 407 ntBASIC18.98■□□□□ 0.63
USP29Q9HBJ7 AL353719.1-201ENST00000566847 864 ntBASIC18.98■□□□□ 0.63
USP29Q9HBJ7 MIR3180-5-201ENST00000583743 153 ntBASIC18.98■□□□□ 0.63
USP29Q9HBJ7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
USP29Q9HBJ7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP29Q9HBJ7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP29Q9HBJ7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.97■□□□□ 0.63
USP29Q9HBJ7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP29Q9HBJ7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.97■□□□□ 0.63
USP29Q9HBJ7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.97■□□□□ 0.63
USP29Q9HBJ7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.97■□□□□ 0.63
USP29Q9HBJ7 AC068880.1-201ENST00000507289 2297 ntBASIC18.97■□□□□ 0.63
USP29Q9HBJ7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms