Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF2Q9HAU5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF2Q9HAU5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
UPF2Q9HAU5 UNC93B4-201ENST00000505679 747 ntBASIC22.66■■□□□ 1.22
UPF2Q9HAU5 PRSS44-201ENST00000515154 1146 ntBASIC22.66■■□□□ 1.22
UPF2Q9HAU5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.66■■□□□ 1.22
UPF2Q9HAU5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.66■■□□□ 1.22
UPF2Q9HAU5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.66■■□□□ 1.22
UPF2Q9HAU5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.66■■□□□ 1.22
UPF2Q9HAU5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF2Q9HAU5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
UPF2Q9HAU5 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
UPF2Q9HAU5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 AC008556.1-201ENST00000610908 2040 ntBASIC22.65■■□□□ 1.22
UPF2Q9HAU5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 KRT8P11-201ENST00000409686 1436 ntBASIC22.65■■□□□ 1.22
UPF2Q9HAU5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPF2Q9HAU5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
UPF2Q9HAU5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
UPF2Q9HAU5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
UPF2Q9HAU5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC22.64■■□□□ 1.22
UPF2Q9HAU5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 Z85996.1-201ENST00000494644 937 ntBASIC22.64■■□□□ 1.21
UPF2Q9HAU5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC22.64■■□□□ 1.21
UPF2Q9HAU5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPF2Q9HAU5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 NCF1B-203ENST00000435988 1254 ntBASIC22.62■■□□□ 1.21
UPF2Q9HAU5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.62■■□□□ 1.21
UPF2Q9HAU5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 AL138781.1-201ENST00000566567 1274 ntBASIC22.62■■□□□ 1.21
UPF2Q9HAU5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPF2Q9HAU5 MYLKP1-201ENST00000509077 1580 ntBASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms