Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 ATP5G2P4-201ENST00000442175 420 ntBASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 VN2R19P-201ENST00000442399 1052 ntBASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRFN3Q9BTN0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 HCG4B-203ENST00000450128 991 ntBASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 AC073592.5-201ENST00000624854 528 ntBASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 AC125634.1-201ENST00000438758 1403 ntBASIC18.32■□□□□ 0.52
LRFN3Q9BTN0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 BASP1P1-201ENST00000430708 665 ntBASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 FAM58CP-201ENST00000435741 640 ntBASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 AL512353.2-201ENST00000448759 1962 ntBASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.31■□□□□ 0.52
LRFN3Q9BTN0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 AP005212.1-201ENST00000581547 1997 ntBASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.3■□□□□ 0.52
LRFN3Q9BTN0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms