Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC064836.3-201ENST00000607928 673 ntBASIC24.47■■□□□ 1.51
ABCA3Q99758 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC24.47■■□□□ 1.51
ABCA3Q99758 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.46■■□□□ 1.51
ABCA3Q99758 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC24.46■■□□□ 1.51
ABCA3Q99758 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.46■■□□□ 1.51
ABCA3Q99758 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ABCA3Q99758 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC24.46■■□□□ 1.51
ABCA3Q99758 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.46■■□□□ 1.51
ABCA3Q99758 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
ABCA3Q99758 ASL-204ENST00000395331 1538 ntTSL 5 BASIC24.46■■□□□ 1.51
ABCA3Q99758 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ABCA3Q99758 FUOM-202ENST00000368551 628 ntTSL 3 BASIC24.46■■□□□ 1.51
ABCA3Q99758 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
ABCA3Q99758 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC24.46■■□□□ 1.51
ABCA3Q99758 SDCCAG3P1-201ENST00000589292 1150 ntBASIC24.46■■□□□ 1.51
ABCA3Q99758 RPS15-207ENST00000591032 550 ntTSL 3 BASIC24.46■■□□□ 1.51
ABCA3Q99758 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.46■■□□□ 1.51
ABCA3Q99758 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ABCA3Q99758 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ABCA3Q99758 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC24.45■■□□□ 1.5
ABCA3Q99758 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ABCA3Q99758 AC108751.1-201ENST00000490852 363 ntBASIC24.45■■□□□ 1.5
ABCA3Q99758 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
ABCA3Q99758 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC24.45■■□□□ 1.5
ABCA3Q99758 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
ABCA3Q99758 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ABCA3Q99758 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
ABCA3Q99758 AC079776.2-201ENST00000641154 1609 ntBASIC24.45■■□□□ 1.5
ABCA3Q99758 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
ABCA3Q99758 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC24.45■■□□□ 1.5
ABCA3Q99758 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ABCA3Q99758 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ABCA3Q99758 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ABCA3Q99758 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ABCA3Q99758 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ABCA3Q99758 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC24.45■■□□□ 1.5
ABCA3Q99758 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
ABCA3Q99758 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
ABCA3Q99758 AC009102.3-201ENST00000623118 1491 ntBASIC24.44■■□□□ 1.5
ABCA3Q99758 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC24.44■■□□□ 1.5
ABCA3Q99758 MTCL1P1-201ENST00000446207 792 ntBASIC24.44■■□□□ 1.5
ABCA3Q99758 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC24.44■■□□□ 1.5
ABCA3Q99758 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ABCA3Q99758 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
ABCA3Q99758 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC24.44■■□□□ 1.5
ABCA3Q99758 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC24.44■■□□□ 1.5
ABCA3Q99758 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ABCA3Q99758 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
ABCA3Q99758 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ABCA3Q99758 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ABCA3Q99758 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ABCA3Q99758 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ABCA3Q99758 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ABCA3Q99758 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC24.44■■□□□ 1.5
ABCA3Q99758 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24.44■■□□□ 1.5
ABCA3Q99758 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ABCA3Q99758 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC24.44■■□□□ 1.5
ABCA3Q99758 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC24.44■■□□□ 1.5
ABCA3Q99758 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC24.44■■□□□ 1.5
ABCA3Q99758 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ABCA3Q99758 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ABCA3Q99758 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ABCA3Q99758 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
ABCA3Q99758 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
ABCA3Q99758 ATP6V0CP3-201ENST00000417255 467 ntBASIC24.43■■□□□ 1.5
ABCA3Q99758 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC24.43■■□□□ 1.5
ABCA3Q99758 NKAPP1-205ENST00000585790 367 ntBASIC24.43■■□□□ 1.5
ABCA3Q99758 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC24.43■■□□□ 1.5
ABCA3Q99758 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC24.43■■□□□ 1.5
ABCA3Q99758 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC24.43■■□□□ 1.5
ABCA3Q99758 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC24.43■■□□□ 1.5
ABCA3Q99758 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
ABCA3Q99758 AC112907.3-201ENST00000577781 2400 ntBASIC24.42■■□□□ 1.5
ABCA3Q99758 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ABCA3Q99758 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ABCA3Q99758 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
ABCA3Q99758 PNMT-202ENST00000394246 821 ntTSL 2 BASIC24.42■■□□□ 1.5
ABCA3Q99758 HTR5BP-201ENST00000430851 1154 ntBASIC24.42■■□□□ 1.5
ABCA3Q99758 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC24.42■■□□□ 1.5
ABCA3Q99758 MIR3197-201ENST00000582241 73 ntBASIC24.42■■□□□ 1.5
ABCA3Q99758 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC24.42■■□□□ 1.5
ABCA3Q99758 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.42■■□□□ 1.5
ABCA3Q99758 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
ABCA3Q99758 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ABCA3Q99758 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.41■■□□□ 1.5
ABCA3Q99758 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.41■■□□□ 1.5
ABCA3Q99758 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC24.41■■□□□ 1.5
ABCA3Q99758 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC24.41■■□□□ 1.5
ABCA3Q99758 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC24.41■■□□□ 1.5
ABCA3Q99758 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.41■■□□□ 1.5
ABCA3Q99758 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC24.41■■□□□ 1.5
ABCA3Q99758 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC24.41■■□□□ 1.5
ABCA3Q99758 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ABCA3Q99758 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms