Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CGREF1Q99674 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.55■□□□□ 0.4
CGREF1Q99674 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.55■□□□□ 0.4
CGREF1Q99674 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.55■□□□□ 0.4
CGREF1Q99674 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.55■□□□□ 0.4
CGREF1Q99674 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CGREF1Q99674 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
CGREF1Q99674 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.55■□□□□ 0.4
CGREF1Q99674 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.55■□□□□ 0.4
CGREF1Q99674 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.55■□□□□ 0.4
CGREF1Q99674 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CGREF1Q99674 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.55■□□□□ 0.4
CGREF1Q99674 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.54■□□□□ 0.4
CGREF1Q99674 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CGREF1Q99674 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.54■□□□□ 0.4
CGREF1Q99674 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.54■□□□□ 0.4
CGREF1Q99674 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CGREF1Q99674 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 FLJ13224-201ENST00000313737 1514 ntBASIC17.54■□□□□ 0.4
CGREF1Q99674 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CGREF1Q99674 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CGREF1Q99674 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 AC004951.3-201ENST00000418645 1148 ntBASIC17.54■□□□□ 0.4
CGREF1Q99674 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.54■□□□□ 0.4
CGREF1Q99674 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CGREF1Q99674 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.54■□□□□ 0.4
CGREF1Q99674 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CGREF1Q99674 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.54■□□□□ 0.4
CGREF1Q99674 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.54■□□□□ 0.4
CGREF1Q99674 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 MST1L-201ENST00000442552 2185 ntBASIC17.54■□□□□ 0.4
CGREF1Q99674 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.54■□□□□ 0.4
CGREF1Q99674 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.54■□□□□ 0.4
CGREF1Q99674 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.54■□□□□ 0.4
CGREF1Q99674 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.54■□□□□ 0.4
CGREF1Q99674 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CGREF1Q99674 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CGREF1Q99674 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CGREF1Q99674 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.53■□□□□ 0.4
CGREF1Q99674 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.53■□□□□ 0.4
CGREF1Q99674 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.53■□□□□ 0.4
CGREF1Q99674 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.53■□□□□ 0.4
CGREF1Q99674 AL109659.2-201ENST00000606809 1674 ntBASIC17.53■□□□□ 0.4
CGREF1Q99674 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.53■□□□□ 0.4
CGREF1Q99674 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CGREF1Q99674 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.53■□□□□ 0.4
CGREF1Q99674 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.53■□□□□ 0.4
CGREF1Q99674 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.53■□□□□ 0.4
CGREF1Q99674 CKBP1-201ENST00000565489 1086 ntBASIC17.53■□□□□ 0.4
CGREF1Q99674 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.53■□□□□ 0.4
CGREF1Q99674 AC124016.1-201ENST00000609552 612 ntBASIC17.53■□□□□ 0.4
CGREF1Q99674 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CGREF1Q99674 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.53■□□□□ 0.4
CGREF1Q99674 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CGREF1Q99674 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CGREF1Q99674 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.52■□□□□ 0.4
CGREF1Q99674 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.52■□□□□ 0.4
CGREF1Q99674 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms