Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
S1PR3Q99500 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.26■□□□□ 0.03
S1PR3Q99500 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
S1PR3Q99500 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
S1PR3Q99500 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.26■□□□□ 0.03
S1PR3Q99500 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.26■□□□□ 0.03
S1PR3Q99500 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
S1PR3Q99500 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
S1PR3Q99500 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
S1PR3Q99500 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.25■□□□□ 0.03
S1PR3Q99500 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.25■□□□□ 0.03
S1PR3Q99500 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
S1PR3Q99500 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.25■□□□□ 0.03
S1PR3Q99500 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.25■□□□□ 0.03
S1PR3Q99500 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.25■□□□□ 0.03
S1PR3Q99500 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
S1PR3Q99500 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.25■□□□□ 0.03
S1PR3Q99500 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.25■□□□□ 0.03
S1PR3Q99500 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
S1PR3Q99500 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
S1PR3Q99500 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
S1PR3Q99500 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
S1PR3Q99500 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 AL357033.4-201ENST00000617703 1807 ntBASIC15.24■□□□□ 0.03
S1PR3Q99500 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.24■□□□□ 0.03
S1PR3Q99500 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
S1PR3Q99500 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
S1PR3Q99500 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
S1PR3Q99500 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
S1PR3Q99500 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.24■□□□□ 0.03
S1PR3Q99500 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.24■□□□□ 0.03
S1PR3Q99500 AL596275.1-201ENST00000423464 877 ntBASIC15.24■□□□□ 0.03
S1PR3Q99500 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.24■□□□□ 0.03
S1PR3Q99500 CA15P1-201ENST00000481698 905 ntBASIC15.24■□□□□ 0.03
S1PR3Q99500 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.24■□□□□ 0.03
S1PR3Q99500 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.24■□□□□ 0.03
S1PR3Q99500 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
S1PR3Q99500 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 AL354751.1-201ENST00000412768 1863 ntBASIC15.24■□□□□ 0.03
S1PR3Q99500 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
S1PR3Q99500 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.24■□□□□ 0.03
S1PR3Q99500 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
S1PR3Q99500 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
S1PR3Q99500 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
S1PR3Q99500 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
S1PR3Q99500 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.23■□□□□ 0.03
S1PR3Q99500 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
S1PR3Q99500 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
S1PR3Q99500 AL109659.2-201ENST00000606809 1674 ntBASIC15.23■□□□□ 0.03
S1PR3Q99500 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
S1PR3Q99500 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
S1PR3Q99500 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.23■□□□□ 0.03
S1PR3Q99500 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
S1PR3Q99500 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.23■□□□□ 0.03
S1PR3Q99500 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
S1PR3Q99500 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.23■□□□□ 0.03
S1PR3Q99500 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
S1PR3Q99500 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
S1PR3Q99500 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms