Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CMTM3Q96MX0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.88■□□□□ 0.13
CMTM3Q96MX0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 C1QL1P1-201ENST00000568105 661 ntBASIC15.87■□□□□ 0.13
CMTM3Q96MX0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMTM3Q96MX0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 PHGDH-209ENST00000641074 1780 ntBASIC15.86■□□□□ 0.13
CMTM3Q96MX0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.86■□□□□ 0.13
CMTM3Q96MX0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 MIR5787-201ENST00000611784 55 ntBASIC15.86■□□□□ 0.13
CMTM3Q96MX0 AC092437.1-201ENST00000624794 1048 ntBASIC15.86■□□□□ 0.13
CMTM3Q96MX0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CMTM3Q96MX0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMTM3Q96MX0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms