Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 AC091874.3-201ENST00000512672 1195 ntBASIC14.1□□□□□ -0.15
LINC00479Q96M42 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00479Q96M42 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00479Q96M42 AC141586.5-201ENST00000624546 2050 ntBASIC14.1□□□□□ -0.15
LINC00479Q96M42 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 AL162430.1-201ENST00000480705 870 ntBASIC14.09□□□□□ -0.15
LINC00479Q96M42 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LINC00479Q96M42 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00479Q96M42 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00479Q96M42 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00479Q96M42 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00479Q96M42 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00479Q96M42 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00479Q96M42 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00479Q96M42 KRT8P45-201ENST00000414328 1447 ntBASIC14.08□□□□□ -0.15
LINC00479Q96M42 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LINC00479Q96M42 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00479Q96M42 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00479Q96M42 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00479Q96M42 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00479Q96M42 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00479Q96M42 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00479Q96M42 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00479Q96M42 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00479Q96M42 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00479Q96M42 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC00479Q96M42 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00479Q96M42 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.08□□□□□ -0.16
LINC00479Q96M42 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.08□□□□□ -0.16
LINC00479Q96M42 MIR5787-201ENST00000611784 55 ntBASIC14.08□□□□□ -0.16
LINC00479Q96M42 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.08□□□□□ -0.16
LINC00479Q96M42 FLJ13224-201ENST00000313737 1514 ntBASIC14.08□□□□□ -0.16
LINC00479Q96M42 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00479Q96M42 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LINC00479Q96M42 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00479Q96M42 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.08□□□□□ -0.16
LINC00479Q96M42 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LINC00479Q96M42 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LINC00479Q96M42 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms