Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 AP002982.1-201ENST00000492365 877 ntBASIC19.01■□□□□ 0.63
C9orf72Q96LT7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 AL357033.4-201ENST00000617703 1807 ntBASIC19.01■□□□□ 0.63
C9orf72Q96LT7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf72Q96LT7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
C9orf72Q96LT7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19■□□□□ 0.63
C9orf72Q96LT7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19■□□□□ 0.63
C9orf72Q96LT7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
C9orf72Q96LT7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
C9orf72Q96LT7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19■□□□□ 0.63
C9orf72Q96LT7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 FAM197Y1-201ENST00000421178 764 ntBASIC19■□□□□ 0.63
C9orf72Q96LT7 AL355355.2-201ENST00000442321 338 ntBASIC19■□□□□ 0.63
C9orf72Q96LT7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19■□□□□ 0.63
C9orf72Q96LT7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
C9orf72Q96LT7 TSPY15P-201ENST00000457163 923 ntBASIC19■□□□□ 0.63
C9orf72Q96LT7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19■□□□□ 0.63
C9orf72Q96LT7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19■□□□□ 0.63
C9orf72Q96LT7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19■□□□□ 0.63
C9orf72Q96LT7 AL355075.4-201ENST00000554988 638 ntBASIC19■□□□□ 0.63
C9orf72Q96LT7 AL353708.3-201ENST00000610272 989 ntBASIC19■□□□□ 0.63
C9orf72Q96LT7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19■□□□□ 0.63
C9orf72Q96LT7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19■□□□□ 0.63
C9orf72Q96LT7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19■□□□□ 0.63
C9orf72Q96LT7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19■□□□□ 0.63
C9orf72Q96LT7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19■□□□□ 0.63
C9orf72Q96LT7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf72Q96LT7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19■□□□□ 0.63
C9orf72Q96LT7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19■□□□□ 0.63
C9orf72Q96LT7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 AC211429.1-201ENST00000415277 523 ntBASIC18.99■□□□□ 0.63
C9orf72Q96LT7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 AP003071.4-201ENST00000562276 1284 ntBASIC18.99■□□□□ 0.63
C9orf72Q96LT7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.99■□□□□ 0.63
C9orf72Q96LT7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf72Q96LT7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms