Protein–RNA interactions for Protein: Q96JQ0

DCHS1, Protocadherin-16, humanhuman

Predictions only

Length 3,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1Q96JQ0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 AC006128.1-201ENST00000624704 1661 ntBASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DCHS1Q96JQ0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 ATP5G2P4-201ENST00000442175 420 ntBASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 AC018845.2-201ENST00000568326 409 ntBASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 AL132655.2-201ENST00000596276 594 ntBASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 AC011467.2-201ENST00000598425 242 ntBASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DCHS1Q96JQ0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 AL512353.2-201ENST00000448759 1962 ntBASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DCHS1Q96JQ0 PMS2P4-201ENST00000412466 1052 ntBASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 SLC25A6P5-201ENST00000435663 894 ntBASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 HCG4B-203ENST00000450128 991 ntBASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 AL513210.1-201ENST00000629608 234 ntBASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 CR383656.12-201ENST00000549567 513 ntBASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 NKAPP1-205ENST00000585790 367 ntBASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.53■□□□□ 0.4
DCHS1Q96JQ0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DCHS1Q96JQ0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
DCHS1Q96JQ0 AC004945.1-201ENST00000416738 983 ntBASIC17.52■□□□□ 0.4
DCHS1Q96JQ0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.52■□□□□ 0.4
DCHS1Q96JQ0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.52■□□□□ 0.4
DCHS1Q96JQ0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.52■□□□□ 0.4
DCHS1Q96JQ0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.52■□□□□ 0.4
DCHS1Q96JQ0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
DCHS1Q96JQ0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms