Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCPIP1Q96JH7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 SLC25A6P5-201ENST00000435663 894 ntBASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCPIP1Q96JH7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 HMGA1P5-201ENST00000412453 271 ntBASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCPIP1Q96JH7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 NEK4P2-201ENST00000580004 1012 ntBASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 FAM87A-204ENST00000613235 858 ntBASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.4■□□□□ 0.7
VCPIP1Q96JH7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VCPIP1Q96JH7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VCPIP1Q96JH7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms