Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 ECEL1P2-202ENST00000465689 757 ntBASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDLIM5Q96HC4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDLIM5Q96HC4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 AC138028.4-201ENST00000564984 1845 ntBASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 PHGDH-209ENST00000641074 1780 ntBASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDLIM5Q96HC4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 SEC1P-202ENST00000473944 940 ntBASIC18■□□□□ 0.47
PDLIM5Q96HC4 AC010240.3-201ENST00000607688 395 ntBASIC18■□□□□ 0.47
PDLIM5Q96HC4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 LINC01568-207ENST00000641790 1380 ntBASIC18■□□□□ 0.47
PDLIM5Q96HC4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDLIM5Q96HC4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18■□□□□ 0.47
PDLIM5Q96HC4 KRT18P22-201ENST00000402024 1347 ntBASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 FLJ13224-201ENST00000313737 1514 ntBASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 AC009947.2-201ENST00000444014 672 ntBASIC17.99■□□□□ 0.47
PDLIM5Q96HC4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms