Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD4Q96DM1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PGBD4Q96DM1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PGBD4Q96DM1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 AC026396.1-201ENST00000419388 421 ntBASIC19.95■□□□□ 0.78
PGBD4Q96DM1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PGBD4Q96DM1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.94■□□□□ 0.78
PGBD4Q96DM1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 MIR149-201ENST00000384879 89 ntBASIC19.93■□□□□ 0.78
PGBD4Q96DM1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 AC104819.1-201ENST00000504587 486 ntBASIC19.93■□□□□ 0.78
PGBD4Q96DM1 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 AC008687.5-201ENST00000593746 558 ntBASIC19.93■□□□□ 0.78
PGBD4Q96DM1 AL121772.3-201ENST00000610840 674 ntBASIC19.93■□□□□ 0.78
PGBD4Q96DM1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.93■□□□□ 0.78
PGBD4Q96DM1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 AL353692.3-201ENST00000407031 1396 ntBASIC19.92■□□□□ 0.78
PGBD4Q96DM1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PGBD4Q96DM1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PGBD4Q96DM1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PGBD4Q96DM1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PGBD4Q96DM1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PGBD4Q96DM1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PGBD4Q96DM1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms